estExt_fgenesh1_pg.C_40955 (Cryphonectria parasitica)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 estExt_fgenesh1_pg.C_40955 T391138_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
qa-1F
M11489_2.00
Neurospora crassa
HHGGNTAADBVYTYAWCCBB

VVGGWTRARBVHTTANCCDD
Transfac
Matys et al.(2006)
F$QA1F_01
0.570 0.725
xlr-1
M02621_2.00
Neurospora crassa
NNNNWNNNN

NNNNWNNNN
PBM
Weirauch et al.(2014)
pTH9683
0.544 0.500
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh1_pg.C_40955 Zinc cluster 40 79

Links

Other Zinc cluster family TFs
Other Cryphonectria parasitica TFs

Invalid Input OrderBy

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action