CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshTM_pg.C_10289
(
Tremella mesenterica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgeneshTM_pg.C_10289
T391165_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_10789
M01383_2.00
Aspergillus nidulans
NRCCTCGGHNNN
NNNDCCGAGGYN
PBM
Lambert et al.(2019)
pEX0250
0.545
0.436
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshTM_pg.C_10289
Zinc cluster
174
214
IACTRCRRQKMKCDGPGQVPCRGCRQAGVPCVFEPRTRPKS
Links
Other
Zinc cluster
family TFs
Other
Tremella mesenterica
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANIA_10789
Aspergillus nidulans
CADANIAG00006801
D
0.545