CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gw1.9.186.1
(
Cryphonectria parasitica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
gw1.9.186.1
T391507_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ANIA_06846
M01390_2.00
Aspergillus nidulans
VTCGGYTA
TARCCGAB
PBM
Lambert et al.(2019)
pEX0258
0.538
0.514
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
gw1.9.186.1
Zinc cluster
8
42
LGCLTCKRRKVKCDEQRPRCSHCERLNLECKWHLA
Links
Other
Zinc cluster
family TFs
Other
Cryphonectria parasitica
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy