CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Pc21g07150
(
Penicillium chrysogenum
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
Pc21g07150
T391834_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
nirA
M01350_2.00
Aspergillus nidulans
SYNCGGANNH
DNNTCCGNRS
PBM
Lambert et al.(2019)
pEX0399
0.582
0.923
nit-4
M01430_2.00
Neurospora crassa
NTCCGCGGVN
NBCCGCGGAN
PBM
Lambert et al.(2019)
pTH8909
0.557
0.846
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pc21g07150.t1
Zinc cluster
16
55
TACVACRKRKSKCDGNLPSCAACSSVYHTPCVYDPNSDHR
Links
Other
Zinc cluster
family TFs
Other
Penicillium chrysogenum
TFs
89 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy