CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_042150
(
Penicillium marneffei
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
PMAA_042150
T392046_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HCBG_03332
M02578_2.00
Histoplasma capsulatum
NNRATCGGRVNN
NNBYCCGATYNN
PBM
Weirauch et al.(2014)
pTH8212
0.544
0.821
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PMAA_042150.t1
Zinc cluster
49
87
MACIVCRKRKLRCDGQKPSCGTCARVGHNCTYDEVRKKS
Links
Other
Zinc cluster
family TFs
Other
Penicillium marneffei
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PMAA_042150
Talaromyces marneffei
PMAA_042150
I
0.683
TSTA_076400
Talaromyces stipitatus
TSTA_076400
N
0.622
A1O1_08152
Capronia coronata
A1O1_08152
I
0.614
GSTUM_00002384001
Tuber melanosporum
GSTUM_00002384001
I
0.594
A1O9_07504
Exophiala aquamarina
A1O9_07504
I
0.574
HMPREF1541_10248
Cyphellophora europaea
HMPREF1541_10248
I
0.557
PV10_08405
Exophiala mesophila
PV10_08405
I
0.544
Z518_05550
Rhinocladiella mackenziei
Z518_05550
I
0.544
PV08_08586
Exophiala spinifera
PV08_08586
I
0.544
PV11_06579
Exophiala sideris
PV11_06579
I
0.544
PV05_08058
Exophiala xenobiotica
PV05_08058
I
0.544
HCBG_03332
Histoplasma capsulatum
HCBG_03332
D
0.544
PV06_10014
Exophiala oligosperma
PV06_10014
I
0.544
HMPREF1120_04213
Exophiala dermatitidis
HMPREF1120_04213
I
0.544
MPH_11572
Macrophomina phaseolina
MPH_11572
I
0.543
UCRNP2_7184
Neofusicoccum parvum
UCRNP2_7184
I
0.543