PMAA_044700 (Penicillium marneffei)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 PMAA_044700 T392052_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ANIA_04558
M02572_2.00
Aspergillus nidulans
NHCGGRWNN

NNWYCCGDN
PBM
Weirauch et al.(2014)
pTH8214
0.654 0.950
NCU01478
M02590_2.00
Neurospora crassa
NNCGGVNNN

NNNBCCGNN
PBM
Weirauch et al.(2014)
pTH8961
0.626 0.850
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PMAA_044700.t1 Zinc cluster 57 96

Links

Other Zinc cluster family TFs
Other Penicillium marneffei TFs

196 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29646.m001078 Ricinus communis 29646.m001078 N 0.000
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I 0.000
Ca_02482 Cicer arietinum Ca_02482 N 0.000
Ca_19863 Cicer arietinum Ca_19863 N 0.000
Cla013743 Citrullus lanatus Cla013743 I 0.000
Cucsa.200860 Cucumis sativus Cucsa.200860 I 0.000
evm.TU.supercontig_55.51 Carica papaya evm.TU.supercontig_55.51 N 0.000
GLYMA06G43560 Glycine max GLYMA06G43560 N 0.000
GLYMA12G14400 Glycine max GLYMA12G14400 N 0.000
GLYMA12G33751 Glycine max GLYMA12G33751 I 0.000
GLYMA13G36741 Glycine max GLYMA13G36741 I 0.000
LjT46P06.140.nd Lotus japonicus LjT46P06.140.nd N 0.000
Lus10038306.g Linum usitatissimum Lus10038306.g N 0.000
MTR_2g091190 Medicago truncatula MTR_2g091190 N 0.000
MTR_4g079760 Medicago truncatula MTR_4g079760 N 0.000
POPTR_0013s12190 Populus trichocarpa POPTR_0013s12190 N 0.000
POPTR_0019s11870 Populus trichocarpa POPTR_0019s11870 N 0.000
SapurV1A.0596s0110 Salix purpurea SapurV1A.0596s0110 N 0.000
SapurV1A.0958s0180 Salix purpurea SapurV1A.0958s0180 N 0.000
SapurV1A.2444s0040 Salix purpurea SapurV1A.2444s0040 N 0.000
TCM_001690 Theobroma cacao TCM_001690 N 0.000
VIT_12s0028g02350 Vitis vinifera VIT_12s0028g02350 N 0.000