CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PMAA_046980
(
Penicillium marneffei
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
PMAA_046980
T392062_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
vad-2
M01420_2.00
Neurospora crassa
NHGWYCGGHNN
NNDCCGRWCDN
PBM
Lambert et al.(2019)
pTH8619
0.659
0.949
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PMAA_046980.t1
Zinc cluster
66
107
RACNECRQQKLRCDVIQEPFMDCSRCRRLKLECKIESNFKRV
Links
Other
Zinc cluster
family TFs
Other
Penicillium marneffei
TFs
126 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy