CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PMAA_060350
(
Penicillium marneffei
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
PMAA_060350
T392103_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Bcin05g07400
M02571_2.00
Botrytis cinerea
NNNCGGNN
NNCCGNNN
PBM
Weirauch et al.(2014)
pTH8348
0.538
0.824
NCU02576
M02597_2.00
Neurospora crassa
NNNCGGVN
NBCCGNNN
PBM
Weirauch et al.(2014)
pTH9668
0.538
0.735
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PMAA_060350.t1
Zinc cluster
36
73
RACNGCRKRKIKCDAATTNTWPCTACLRLKLVCVPPTI
Links
Other
Zinc cluster
family TFs
Other
Penicillium marneffei
TFs
68 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy