SAKL0A09856g (Lachancea kluyveri)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 SAKL0A09856g T392218_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
RGT1
M00092_2.00
Saccharomyces cerevisiae
CGGRDNWWHN

NDWWNHYCCG
PBM
Badis et al.(2008)
RGT1_2131
0.583 0.750
RGT1
M01585_2.00
Saccharomyces cerevisiae
HCGGADNWWN

NWWNHTCCGD
PBM
Zhu et al.(2009)
Rgt1
0.583 0.750
RGT1
M07518_2.00
Saccharomyces cerevisiae
NCGGADNAWHN

NDWTNHTCCGN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0367.1
0.583 0.750
RGT1
M08673_2.00
Saccharomyces cerevisiae
NDNNNYCGGAWWAAYHNNNN

NNNNDRTTWWTCCGRNNNHN
Misc
DeBoer et al.(2011)
YKL038W_803
0.583 0.750
RGT1
M11480_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$RGT1_Q5
0.583 0.750
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SAKL0A09856g Zinc cluster 34 75

Links

Other Zinc cluster family TFs
Other Lachancea kluyveri TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
13522_YKL038W Saccharomyces mikatae 13522_YKL038W I 0.566
13626_YKL038W Saccharomyces paradoxus 13626_YKL038W I 0.583
14629_YKL038W Saccharomyces bayanus 14629_YKL038W I 0.575
AACERI_AaceriAGL083W Saccharomycetaceae sp ashbya aceri AACERI_AaceriAGL083W I 0.555
AGOS_AGL083W Ashbya gossypii AGOS_AGL083W I 0.555
CAGL0L01903g Candida glabrata CAGL0L01903g I 0.558
KLLA0_F25630g Kluyveromyces lactis KLLA0_F25630g N 0.543
KNAG_0A07100 Kazachstania naganishii KNAG_0A07100 I 0.558
Kpol_1002p5 Vanderwaltozyma polyspora Kpol_1002p5 I 0.583
NCAS_0A04750 Naumovozyma castellii NCAS_0A04750 I 0.545
NDAI_0K01800 Naumovozyma dairenensis NDAI_0K01800 I 0.545
RGT1 Saccharomyces cerevisiae YKL038W D 0.583
Scas_Contig625.5 Saccharomyces castellii Scas_Contig625.5 I 0.545
SU7_2014 Saccharomyces arboricola SU7_2014 I 0.583
TDEL_0B06360 Torulaspora delbrueckii TDEL_0B06360 I 0.575
TPHA_0C04280 Tetrapisispora phaffii TPHA_0C04280 I 0.547
ZBAI_03469 Zygosaccharomyces bailii ZBAI_03469 I 0.551
ZBAI_08469 Zygosaccharomyces bailii ZBAI_08469 I 0.551
ZYRO0E05676g Zygosaccharomyces rouxii ZYRO0E05676g I 0.551