CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SAKL0G09768g
(
Lachancea kluyveri
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
SAKL0G09768g
T392258_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
RSC3
M00082_2.00
Saccharomyces cerevisiae
GCGCGCGG
CCGCGCGC
PBM
Badis et al.(2008)
RSC3_2035
0.577
0.833
RSC3
M01576_2.00
Saccharomyces cerevisiae
NNNNNSCGNN
NNCGSNNNNN
PBM
Zhu et al.(2009)
Rsc3
0.577
0.833
RSC3
M07509_2.00
Saccharomyces cerevisiae
NNVCGCG
CGCGBNN
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0374.1
0.577
0.833
RSC3
M08655_2.00
Saccharomyces cerevisiae
NNVCGCG
CGCGBNN
Misc
DeBoer et al.(2011)
YDR303C_580
0.577
0.833
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SAKL0G09768g
Zinc cluster
14
50
PACVQCRKRKIGCDRAKPICGNCLRNGKNDCFYPDVP
Links
Other
Zinc cluster
family TFs
Other
Lachancea kluyveri
TFs
21 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy