XP_002489576.1 (Pichia pastoris)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 XP_002489576.1 T392283_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU04827
M02606_2.00 		Neurospora crassa
NNCGGVNNNN
NNNNBCCGNN		 PBM
Weirauch et al.(2014)
pTH7813 		0.570 0.692
NCU04827
M02607_2.00 		Neurospora crassa
NNNVCGGN
NCCGBNNN		 PBM
Weirauch et al.(2014)
pTH8930 		0.570 0.692
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002489576.1 Zinc cluster 31 78

Links

Other Zinc cluster family TFs
Other Pichia pastoris TFs

Invalid Input OrderBy

129 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action