XP_002490909.1 (Pichia pastoris)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 XP_002490909.1 T392294_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
ARG81
M08441_2.00
Saccharomyces cerevisiae
DTGACTCH

DGAGTCAH
ChIP-chip
Mathelier et al.(2014)
MA0272.1
0.566 0.700
ARG81
M08685_2.00
Saccharomyces cerevisiae
CGGYVKCGG

CCGMBRCCG
Misc
DeBoer et al.(2011)
YML099C_1506
0.566 0.700
ARG81
M11484_2.00
Saccharomyces cerevisiae Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$ARGRII_01
0.566 0.700
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
XP_002490909.1 Zinc cluster 10 49

Links

Other Zinc cluster family TFs
Other Pichia pastoris TFs

Invalid Input OrderBy

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action