Bo1g017590 (Brassica oleracea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 Bo1g017590 T000719_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.847 0.980
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.847 0.980
ERF2
M01631_2.00 		Arabidopsis thaliana
NNNGCCGNCN
NGNCGGCNNN		 PBM
Weirauch et al.(2014)
pTH8113 		0.836 0.980
ERF2
M06672_2.00 		Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND
HNRYGGCGGCGRHDRNDDNDD		 Dap-seq
OMalley et al.(2016)
ERF2_col_a 		0.836 0.980
ERF2
M06673_2.00 		Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR
YGGCGGCKSHDNNDNNNNNNN		 Dap-seq
OMalley et al.(2016)
ERF2_colamp_a 		0.836 0.980
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.796 0.918
A5JTT1_WHEAT
M09700_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_01 		0.744 0.878
PK02330.1
M01095_2.00 		Cannabis sativa
NNNGCCGBCN
NGVCGGCNNN		 PBM
Lambert et al.(2019)
pTH10093 		0.740 0.837
A4F249_TOBAC
M09726_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF2_01 		0.735 0.796
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.734 0.776
A4F248_TOBAC
M09725_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF1_01 		0.733 0.796
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.731 0.837
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.731 0.837
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.731 0.837
ERF6
M01621_2.00 		Arabidopsis thaliana
NNGCCGGCVN
NBGCCGGCNN		 PBM
Weirauch et al.(2014)
pTH7228 		0.730 0.816
ERF6
M06637_2.00 		Arabidopsis thaliana
NHNHHDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHDDNDN		 Dap-seq
OMalley et al.(2016)
ERF6_col 		0.730 0.816
ERF5_TOBAC
M09729_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF4_02 		0.728 0.816
ERF095
M06624_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ESE1_col_a 		0.726 0.776
ERF095
M06625_2.00 		Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR		 Dap-seq
OMalley et al.(2016)
ESE1_colamp_a 		0.726 0.776
ERF109
M00849_2.00 		Arabidopsis thaliana
NGCCGNHNN
NNDNCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RRTF1 		0.724 0.776
ERF109
M06653_2.00 		Arabidopsis thaliana
CKSCGCCGYHWHHNN
NNDDWDRCGGCGSMG		 Dap-seq
OMalley et al.(2016)
RRTF1_col_a 		0.724 0.776
ERF109
M06654_2.00 		Arabidopsis thaliana
HNNHDSCGCCGYHWTHNNN
NNNDAWDRCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
RRTF1_colamp_a 		0.724 0.776
ERF106
M01628_2.00 		Arabidopsis thaliana
NNNVCRVCN
NGBYGBNNN		 PBM
Weirauch et al.(2014)
pTH7426 		0.721 0.735
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.721 0.816
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.721 0.816
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.721 0.816
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.717 0.776
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.717 0.776
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.717 0.776
ERF14
M01045_2.00 		Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN		 PBM
Sullivan et al.(2014)
pTH9793 		0.715 0.735
ERF1B
M01619_2.00 		Arabidopsis thaliana
NMGCCGCCRN
NYGGCGGCKN		 PBM
Weirauch et al.(2014)
pTH8795 		0.703 0.857
ERF1B
M06626_2.00 		Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN
NNNNNNNHDNHDRYGGCGGCKRHDNNDN		 Dap-seq
OMalley et al.(2016)
ERF1_col_a 		0.703 0.857
ERF1B
M06627_2.00 		Arabidopsis thaliana
MGCCGCCD
HGGCGGCK		 Dap-seq
OMalley et al.(2016)
ERF1_colamp_a 		0.703 0.857
ERF1B
M09703_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2_01 		0.703 0.857
ERF1B
M09704_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF1_Q2 		0.703 0.857
RAP2-12
M01046_2.00 		Arabidopsis thaliana
RSMGBMNNNN
NNNNKVCKSY		 PBM
Sullivan et al.(2014)
pTH7359 		0.699 0.755
RAP2-12
M06588_2.00 		Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN
NDNNNDHDDYGGCGGCGGHDN		 Dap-seq
OMalley et al.(2016)
RAP212_col_a 		0.699 0.755
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.699 0.755
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.699 0.755
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.699 0.755
CRF3
M01633_2.00 		Arabidopsis thaliana
NNGCCRNNN
NNNYGGCNN		 PBM
Weirauch et al.(2014)
pTH8110 		0.698 0.714
O65242_TOBAC
M09730_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TSI1_01 		0.695 0.653
ERF091
M06638_2.00 		Arabidopsis thaliana
NNHNYHDCCGCCGCCRY
RYGGCGGCGGHDRNDNN		 Dap-seq
OMalley et al.(2016)
AT4G18450_col_a 		0.691 0.796
Q5Y836_TOBAC
M09732_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF5_02 		0.690 0.796
ERF115
M06657_2.00 		Arabidopsis thaliana
CCGCCGYMRYHDCCR
YGGHDRYKRCGGCGG		 Dap-seq
OMalley et al.(2016)
ERF115_col_a 		0.688 0.796
ERF115
M06658_2.00 		Arabidopsis thaliana
CKCCGCCGYMRYHDY
RHDRYKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ERF115_colamp_a 		0.688 0.796
ERF104
M06682_2.00 		Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN		 Dap-seq
OMalley et al.(2016)
ERF104_col_a 		0.683 0.673
ERF104
M06683_2.00 		Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV		 Dap-seq
OMalley et al.(2016)
ERF104_colamp_a 		0.683 0.673
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g017590.1 AP2 131 183

Links

Other AP2 family TFs
Other Brassica oleracea TFs

1308 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_004330 Trichomonas vaginalis TVAG_004330 N 0.000
TVAG_006520 Trichomonas vaginalis TVAG_006520 N 0.000
TVAG_007060 Trichomonas vaginalis TVAG_007060 N 0.000
TVAG_015360 Trichomonas vaginalis TVAG_015360 N 0.000
TVAG_018730 Trichomonas vaginalis TVAG_018730 N 0.000
TVAG_022640 Trichomonas vaginalis TVAG_022640 N 0.000
TVAG_022870 Trichomonas vaginalis TVAG_022870 N 0.000
TVAG_023890 Trichomonas vaginalis TVAG_023890 N 0.000
TVAG_025350 Trichomonas vaginalis TVAG_025350 N 0.000
TVAG_030270 Trichomonas vaginalis TVAG_030270 N 0.000
TVAG_030650 Trichomonas vaginalis TVAG_030650 N 0.000
TVAG_045200 Trichomonas vaginalis TVAG_045200 N 0.000
TVAG_051380 Trichomonas vaginalis TVAG_051380 N 0.000
TVAG_055730 Trichomonas vaginalis TVAG_055730 N 0.000
TVAG_057510 Trichomonas vaginalis TVAG_057510 N 0.000
TVAG_058980 Trichomonas vaginalis TVAG_058980 N 0.000
TVAG_065250 Trichomonas vaginalis TVAG_065250 N 0.000
TVAG_065540 Trichomonas vaginalis TVAG_065540 N 0.000
TVAG_069420 Trichomonas vaginalis TVAG_069420 N 0.000
TVAG_075700 Trichomonas vaginalis TVAG_075700 N 0.000
TVAG_077710 Trichomonas vaginalis TVAG_077710 N 0.000
TVAG_078220 Trichomonas vaginalis TVAG_078220 N 0.000
TVAG_081270 Trichomonas vaginalis TVAG_081270 N 0.000
TVAG_084310 Trichomonas vaginalis TVAG_084310 N 0.000
TVAG_085010 Trichomonas vaginalis TVAG_085010 N 0.000
TVAG_086760 Trichomonas vaginalis TVAG_086760 N 0.000
TVAG_092250 Trichomonas vaginalis TVAG_092250 N 0.000
TVAG_095370 Trichomonas vaginalis TVAG_095370 N 0.000
TVAG_096560 Trichomonas vaginalis TVAG_096560 N 0.000
TVAG_109190 Trichomonas vaginalis TVAG_109190 N 0.000
TVAG_117610 Trichomonas vaginalis TVAG_117610 N 0.000
TVAG_117870 Trichomonas vaginalis TVAG_117870 N 0.000
TVAG_128100 Trichomonas vaginalis TVAG_128100 N 0.000
TVAG_129250 Trichomonas vaginalis TVAG_129250 N 0.000
TVAG_131780 Trichomonas vaginalis TVAG_131780 N 0.000
TVAG_133720 Trichomonas vaginalis TVAG_133720 N 0.000
TVAG_138460 Trichomonas vaginalis TVAG_138460 N 0.000
TVAG_141080 Trichomonas vaginalis TVAG_141080 N 0.000
TVAG_141640 Trichomonas vaginalis TVAG_141640 N 0.000
TVAG_152080 Trichomonas vaginalis TVAG_152080 N 0.000
TVAG_152850 Trichomonas vaginalis TVAG_152850 N 0.000
TVAG_155260 Trichomonas vaginalis TVAG_155260 N 0.000
TVAG_155470 Trichomonas vaginalis TVAG_155470 N 0.000
TVAG_172760 Trichomonas vaginalis TVAG_172760 N 0.000
TVAG_173010 Trichomonas vaginalis TVAG_173010 N 0.000
TVAG_181790 Trichomonas vaginalis TVAG_181790 N 0.000
TVAG_181810 Trichomonas vaginalis TVAG_181810 N 0.000
TVAG_189450 Trichomonas vaginalis TVAG_189450 N 0.000
TVAG_194050 Trichomonas vaginalis TVAG_194050 N 0.000
TVAG_199660 Trichomonas vaginalis TVAG_199660 N 0.000
TVAG_202410 Trichomonas vaginalis TVAG_202410 N 0.000
TVAG_208390 Trichomonas vaginalis TVAG_208390 N 0.000
TVAG_209630 Trichomonas vaginalis TVAG_209630 N 0.000
TVAG_210220 Trichomonas vaginalis TVAG_210220 N 0.000
TVAG_218370 Trichomonas vaginalis TVAG_218370 N 0.000
TVAG_230320 Trichomonas vaginalis TVAG_230320 N 0.000
TVAG_231870 Trichomonas vaginalis TVAG_231870 N 0.000
TVAG_233530 Trichomonas vaginalis TVAG_233530 N 0.000
TVAG_236380 Trichomonas vaginalis TVAG_236380 N 0.000
TVAG_241060 Trichomonas vaginalis TVAG_241060 N 0.000
TVAG_255040 Trichomonas vaginalis TVAG_255040 N 0.000
TVAG_264410 Trichomonas vaginalis TVAG_264410 N 0.000
TVAG_269480 Trichomonas vaginalis TVAG_269480 N 0.000
TVAG_269580 Trichomonas vaginalis TVAG_269580 N 0.000
TVAG_272550 Trichomonas vaginalis TVAG_272550 N 0.000
TVAG_278760 Trichomonas vaginalis TVAG_278760 N 0.000
TVAG_279620 Trichomonas vaginalis TVAG_279620 N 0.000
TVAG_285040 Trichomonas vaginalis TVAG_285040 N 0.000
TVAG_304110 Trichomonas vaginalis TVAG_304110 I 0.000
TVAG_307820 Trichomonas vaginalis TVAG_307820 N 0.000
TVAG_317130 Trichomonas vaginalis TVAG_317130 N 0.000
TVAG_331810 Trichomonas vaginalis TVAG_331810 N 0.000
TVAG_332350 Trichomonas vaginalis TVAG_332350 N 0.000
TVAG_346350 Trichomonas vaginalis TVAG_346350 N 0.000
TVAG_348790 Trichomonas vaginalis TVAG_348790 N 0.000
TVAG_353210 Trichomonas vaginalis TVAG_353210 N 0.000
TVAG_355410 Trichomonas vaginalis TVAG_355410 N 0.000
TVAG_355880 Trichomonas vaginalis TVAG_355880 N 0.000
TVAG_355890 Trichomonas vaginalis TVAG_355890 N 0.000
TVAG_356990 Trichomonas vaginalis TVAG_356990 N 0.000
TVAG_357700 Trichomonas vaginalis TVAG_357700 N 0.000
TVAG_361810 Trichomonas vaginalis TVAG_361810 N 0.000
TVAG_364890 Trichomonas vaginalis TVAG_364890 N 0.000
TVAG_366530 Trichomonas vaginalis TVAG_366530 N 0.000
TVAG_366770 Trichomonas vaginalis TVAG_366770 N 0.000
TVAG_367290 Trichomonas vaginalis TVAG_367290 N 0.000
TVAG_368880 Trichomonas vaginalis TVAG_368880 N 0.000
TVAG_370220 Trichomonas vaginalis TVAG_370220 N 0.000
TVAG_376580 Trichomonas vaginalis TVAG_376580 N 0.000
TVAG_377000 Trichomonas vaginalis TVAG_377000 N 0.000
TVAG_377090 Trichomonas vaginalis TVAG_377090 N 0.000
TVAG_381530 Trichomonas vaginalis TVAG_381530 N 0.000
TVAG_382960 Trichomonas vaginalis TVAG_382960 N 0.000
TVAG_385530 Trichomonas vaginalis TVAG_385530 N 0.000
TVAG_400660 Trichomonas vaginalis TVAG_400660 N 0.000
TVAG_401510 Trichomonas vaginalis TVAG_401510 N 0.000
TVAG_405610 Trichomonas vaginalis TVAG_405610 N 0.000
TVAG_418100 Trichomonas vaginalis TVAG_418100 N 0.000
TVAG_424630 Trichomonas vaginalis TVAG_424630 N 0.000
TVAG_425150 Trichomonas vaginalis TVAG_425150 N 0.000
TVAG_433330 Trichomonas vaginalis TVAG_433330 N 0.000
TVAG_437540 Trichomonas vaginalis TVAG_437540 N 0.000
TVAG_438970 Trichomonas vaginalis TVAG_438970 N 0.000
TVAG_439000 Trichomonas vaginalis TVAG_439000 N 0.000
TVAG_439290 Trichomonas vaginalis TVAG_439290 N 0.000
TVAG_440300 Trichomonas vaginalis TVAG_440300 N 0.000
TVAG_449370 Trichomonas vaginalis TVAG_449370 N 0.000
TVAG_450870 Trichomonas vaginalis TVAG_450870 N 0.000
TVAG_454650 Trichomonas vaginalis TVAG_454650 N 0.000
TVAG_458610 Trichomonas vaginalis TVAG_458610 N 0.000
TVAG_469490 Trichomonas vaginalis TVAG_469490 N 0.000
TVAG_472310 Trichomonas vaginalis TVAG_472310 N 0.000
TVAG_474270 Trichomonas vaginalis TVAG_474270 I 0.000
TVAG_484220 Trichomonas vaginalis TVAG_484220 N 0.000
TVAG_484250 Trichomonas vaginalis TVAG_484250 N 0.000
TVAG_488780 Trichomonas vaginalis TVAG_488780 N 0.000
TVAG_499220 Trichomonas vaginalis TVAG_499220 N 0.000
TVAG_500620 Trichomonas vaginalis TVAG_500620 N 0.000
TVAG_511200 Trichomonas vaginalis TVAG_511200 N 0.000
TVAG_513300 Trichomonas vaginalis TVAG_513300 N 0.000
TVAG_514390 Trichomonas vaginalis TVAG_514390 N 0.000
TVAG_517040 Trichomonas vaginalis TVAG_517040 N 0.000
TVAG_520380 Trichomonas vaginalis TVAG_520380 N 0.000
TVAG_521260 Trichomonas vaginalis TVAG_521260 N 0.000
TVAG_521560 Trichomonas vaginalis TVAG_521560 N 0.000
TVAG_527500 Trichomonas vaginalis TVAG_527500 N 0.000
TVAG_534250 Trichomonas vaginalis TVAG_534250 N 0.000
TVAG_538000 Trichomonas vaginalis TVAG_538000 N 0.000
TVAG_540060 Trichomonas vaginalis TVAG_540060 N 0.000
TVAG_540620 Trichomonas vaginalis TVAG_540620 N 0.000
TVAG_552960 Trichomonas vaginalis TVAG_552960 N 0.000
TVAG_559230 Trichomonas vaginalis TVAG_559230 N 0.000
TVAG_559790 Trichomonas vaginalis TVAG_559790 N 0.000
TVAG_565490 Trichomonas vaginalis TVAG_565490 N 0.000
TVAG_571460 Trichomonas vaginalis TVAG_571460 N 0.000
TVAG_571520 Trichomonas vaginalis TVAG_571520 N 0.000
TVAG_575020 Trichomonas vaginalis TVAG_575020 N 0.000
TVAG_579320 Trichomonas vaginalis TVAG_579320 N 0.000
TVAG_579820 Trichomonas vaginalis TVAG_579820 N 0.000
TVAG_581530 Trichomonas vaginalis TVAG_581530 N 0.000
TVAG_584420 Trichomonas vaginalis TVAG_584420 N 0.000
TVAG_586700 Trichomonas vaginalis TVAG_586700 N 0.000
TVAG_593090 Trichomonas vaginalis TVAG_593090 N 0.000
TVAG_595620 Trichomonas vaginalis TVAG_595620 N 0.000
TVAG_596600 Trichomonas vaginalis TVAG_596600 N 0.000
TVAG_597840 Trichomonas vaginalis TVAG_597840 N 0.000