CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART01G28650
(
Oryza barthii
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00847 (AP2)
IPR001471
OBART01G28650
T003075_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART01G28650.7
AP2
364
404
RRYRGVRQRPWGKWAAEIRDPVKAARVWLGTFATAGAGASE
Links
Other
AP2
family TFs
Other
Oryza barthii
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Eucgr.H04892
Eucalyptus grandis
Eucgr.H04892
I
0.711
Eucgr.K02193
Eucalyptus grandis
Eucgr.K02193
I
0.693
Eucgr.K02780
Eucalyptus grandis
Eucgr.K02780
I
0.693
mgf021642m
Mimulus guttatus
mgf021642m
I
0.681
OLONG_020978
Oryza longistaminata
OLONG_020978
I
0.680
PGSC0003DMG400014240
Solanum tuberosum
PGSC0003DMG400014240
I
0.714
PGSC0003DMG400019693
Solanum tuberosum
PGSC0003DMG400019693
I
0.715
Solyc03g118190.2
Solanum lycopersicum
Solyc03g118190.2
I
0.714
Solyc04g051360.2
Solanum lycopersicum
Solyc04g051360.2
I
0.715