ORGLA03G0058900 (Oryza glaberrima)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORGLA03G0058900 T003869_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
P93392_TOBAC
M09731_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$OPBP1_01 		0.693 0.735
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA03G0058900.1 AP2 94 145

Links

Other AP2 family TFs
Other Oryza glaberrima TFs

156 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29584.m000234 Ricinus communis 29584.m000234 I 0.679
29680.m001678 Ricinus communis 29680.m001678 I 0.678
29895.m000321 Ricinus communis 29895.m000321 I 0.680
29900.m001561 Ricinus communis 29900.m001561 I 0.677
AC206951.3_FG016 Zea mays AC206951.3_FG016 N 0.690
AC206951.3_FG017 Zea mays AC206951.3_FG017 I 0.739
Aquca_017_00711 Aquilegia coerulea Aquca_017_00711 I 0.679
BGIOSGA003364 Oryza indica BGIOSGA003364 I 0.694
BGIOSGA011326 Oryza indica BGIOSGA011326 I 0.821
BGIOSGA012597 Oryza indica BGIOSGA012597 N 0.699
BGIOSGA023726 Oryza indica BGIOSGA023726 N 0.698
BRADI1G00670 Brachypodium distachyon BRADI1G00670 I 0.678
BRADI1G72450 Brachypodium distachyon BRADI1G72450 I 0.741
BRADI2G11890 Brachypodium distachyon BRADI2G11890 I 0.694
BRADI5G25570 Brachypodium distachyon BRADI5G25570 I 0.680
cassava22677.valid.m1 Manihot esculenta cassava22677.valid.m1 I 0.703
cassava37347.valid.m1 Manihot esculenta cassava37347.valid.m1 I 0.679
cassava38166.valid.m1 Manihot esculenta cassava38166.valid.m1 I 0.679
cassava38509.m1 Manihot esculenta cassava38509.m1 I 0.679
cassava47179.m1 Manihot esculenta cassava47179.m1 I 0.712
cassava632.valid.m1 Manihot esculenta cassava632.valid.m1 I 0.679
Ca_07754 Cicer arietinum Ca_07754 I 0.689
Ca_12081 Cicer arietinum Ca_12081 I 0.695
Ca_23170 Cicer arietinum Ca_23170 I 0.681
chr5.CM0341.90.nc Lotus japonicus chr5.CM0341.90.nc I 0.706
chr6.CM1613.110.nc Lotus japonicus chr6.CM1613.110.nc I 0.685
Ciclev10005820m.g Citrus clementina Ciclev10005820m.g I 0.681
Ciclev10021622m.g Citrus clementina Ciclev10021622m.g I 0.699
Ciclev10024142m.g Citrus clementina Ciclev10024142m.g I 0.702
Cla006080 Citrullus lanatus Cla006080 I 0.677
Cla007697 Citrullus lanatus Cla007697 I 0.678
Cucsa.053560 Cucumis sativus Cucsa.053560 I 0.678
Cucsa.062330 Cucumis sativus Cucsa.062330 I 0.699
evm.TU.supercontig_162.25 Carica papaya evm.TU.supercontig_162.25 I 0.706
evm.TU.supercontig_44.71 Carica papaya evm.TU.supercontig_44.71 I 0.681
F775_25471 Aegilops tauschii F775_25471 I 0.690
gene08077-v1.0-hybrid Fragaria vesca gene08077-v1.0-hybrid I 0.689
gene11442-v1.0-hybrid Fragaria vesca gene11442-v1.0-hybrid I 0.686
GLYMA10G00980 Glycine max GLYMA10G00980 I 0.698
GLYMA10G04210 Glycine max GLYMA10G04210 I 0.689
GLYMA13G18410 Glycine max GLYMA13G18410 I 0.689
GLYMA19G43815 Glycine max GLYMA19G43815 I 0.696
Gorai.005G049300 Gossypium raimondii Gorai.005G049300 I 0.703
Gorai.007G281000 Gossypium raimondii Gorai.007G281000 I 0.706
GRMZM2G025062 Zea mays GRMZM2G025062 I 0.704
GRMZM2G053503 Zea mays GRMZM2G053503 I 0.694
GRMZM2G169382 Zea mays GRMZM2G169382 I 0.694
GRMZM2G381441 Zea mays GRMZM2G381441 I 0.684
GSMUA_Achr1G01380_001 Musa acuminata GSMUA_Achr1G01380_001 I 0.677
GSMUA_Achr4G05520_001 Musa acuminata GSMUA_Achr4G05520_001 I 0.680
LjSGA_017232.1 Lotus japonicus LjSGA_017232.1 I 0.689
LPERR03G14670 Leersia perrieri LPERR03G14670 N 0.699
Lus10011829.g Linum usitatissimum Lus10011829.g I 0.678
Lus10021193.g Linum usitatissimum Lus10021193.g I 0.678
Lus10022015.g Linum usitatissimum Lus10022015.g I 0.683
Lus10022935.g Linum usitatissimum Lus10022935.g I 0.681
Lus10042557.g Linum usitatissimum Lus10042557.g I 0.683
MDP0000127134 Malus domestica MDP0000127134 I 0.681
MDP0000167207 Malus domestica MDP0000167207 I 0.681
MDP0000235313 Malus domestica MDP0000235313 I 0.681
MDP0000246808 Malus domestica MDP0000246808 I 0.709
MDP0000322279 Malus domestica MDP0000322279 I 0.696
MDP0000447570 Malus domestica MDP0000447570 I 0.709
MDP0000855671 Malus domestica MDP0000855671 I 0.689
mgf018693m Mimulus guttatus mgf018693m I 0.703
mgf023600m Mimulus guttatus mgf023600m I 0.700
MLOC_80197 Hordeum vulgare MLOC_80197 I 0.681
MTR_1g043350 Medicago truncatula MTR_1g043350 I 0.681
MTR_1g069945 Medicago truncatula MTR_1g069945 I 0.689
MTR_1g074370 Medicago truncatula MTR_1g074370 I 0.695
OBART03G06100 Oryza barthii OBART03G06100 I 0.821
OBART07G26160 Oryza barthii OBART07G26160 N 0.698
OGLUM03G06090 Oryza glumaepatula OGLUM03G06090 N 0.690
OGLUM03G06100 Oryza glumaepatula OGLUM03G06100 I 0.821
OGLUM03G17210 Oryza glumaepatula OGLUM03G17210 N 0.699
OGLUM07G26170 Oryza glumaepatula OGLUM07G26170 N 0.698
OMERI03G05920 Oryza meridionalis OMERI03G05920 I 0.821
OMERI03G15020 Oryza meridionalis OMERI03G15020 N 0.699
OMERI07G22780 Oryza meridionalis OMERI07G22780 N 0.698
OMERI12G11270 Oryza meridionalis OMERI12G11270 I 0.694
ONIVA03G06100 Oryza nivara ONIVA03G06100 N 0.690
ONIVA03G06110 Oryza nivara ONIVA03G06110 I 0.821
ONIVA03G17860 Oryza nivara ONIVA03G17860 N 0.699
ONIVA07G25780 Oryza nivara ONIVA07G25780 N 0.698
OPUNC01G12900 Oryza punctata OPUNC01G12900 I 0.694
OPUNC03G05900 Oryza punctata OPUNC03G05900 I 0.792
OPUNC03G16250 Oryza punctata OPUNC03G16250 N 0.699
OPUNC03G38860 Oryza punctata OPUNC03G38860 I 0.682
OPUNC07G24590 Oryza punctata OPUNC07G24590 N 0.698
orange1.1g039409m.g Citrus sinensis orange1.1g039409m.g I 0.681
orange1.1g042174m.g Citrus sinensis orange1.1g042174m.g I 0.699
orange1.1g047387m.g Citrus sinensis orange1.1g047387m.g I 0.702
ORGLA01G0108600 Oryza glaberrima ORGLA01G0108600 I 0.694
ORGLA03G0058800 Oryza glaberrima ORGLA03G0058800 N 0.690
ORGLA03G0161100 Oryza glaberrima ORGLA03G0161100 N 0.699
ORGLA07G0205000 Oryza glaberrima ORGLA07G0205000 N 0.698
ORUFI03G05920 Oryza rufipogon ORUFI03G05920 N 0.690
ORUFI03G17430 Oryza rufipogon ORUFI03G17430 N 0.699
ORUFI07G27120 Oryza rufipogon ORUFI07G27120 N 0.698
OS01G0313300 Oryza sativa OS01G0313300 I 0.694
OS03G0183300 Oryza sativa OS03G0183300 I 0.821
OS03G0341000 Oryza sativa OS03G0341000 N 0.699
OS07G0674800 Oryza sativa OS07G0674800 N 0.698
P93392_TOBAC Nicotiana tabacum P93392_TOBAC D 0.693
Pavir.Ba00136 Panicum virgatum Pavir.Ba00136 I 0.706
Pavir.Bb03609 Panicum virgatum Pavir.Bb03609 I 0.706
Pavir.Eb02324 Panicum virgatum Pavir.Eb02324 I 0.694
Pavir.Ia04158 Panicum virgatum Pavir.Ia04158 I 0.730
Pavir.Ib00527 Panicum virgatum Pavir.Ib00527 N 0.716
Pavir.Ib00528 Panicum virgatum Pavir.Ib00528 I 0.740
Pavir.J08480 Panicum virgatum Pavir.J08480 I 0.694
Pavir.J12680 Panicum virgatum Pavir.J12680 N 0.729
Pavir.J16149 Panicum virgatum Pavir.J16149 I 0.678
Pm009382 Prunus mume Pm009382 I 0.681
Pm020604 Prunus mume Pm020604 I 0.692
POPTR_0002s04020 Populus trichocarpa POPTR_0002s04020 I 0.699
POPTR_0005s24460 Populus trichocarpa POPTR_0005s24460 I 0.701
POPTR_0008s16610 Populus trichocarpa POPTR_0008s16610 I 0.678
POPTR_0010s08300 Populus trichocarpa POPTR_0010s08300 I 0.700
POPTR_0013s04240 Populus trichocarpa POPTR_0013s04240 I 0.703
POPTR_0019s03170 Populus trichocarpa POPTR_0019s03170 I 0.680
POPTR_0102s00200 Populus trichocarpa POPTR_0102s00200 I 0.680
PRUPE_ppa023839mg Prunus persica PRUPE_ppa023839mg I 0.692
PRUPE_ppa024173mg Prunus persica PRUPE_ppa024173mg I 0.681
SapurV1A.0006s0850 Salix purpurea SapurV1A.0006s0850 I 0.699
SapurV1A.0007s0980 Salix purpurea SapurV1A.0007s0980 I 0.686
SapurV1A.0021s0980 Salix purpurea SapurV1A.0021s0980 I 0.677
SapurV1A.0233s0360 Salix purpurea SapurV1A.0233s0360 I 0.677
SapurV1A.0233s0370 Salix purpurea SapurV1A.0233s0370 I 0.701
SapurV1A.2490s0030 Salix purpurea SapurV1A.2490s0030 I 0.686
SapurV1A.4312s0010 Salix purpurea SapurV1A.4312s0010 I 0.677
Sb01g000352 Sorghum bicolor Sb01g000352 I 0.679
Sb01g045040 Sorghum bicolor Sb01g045040 I 0.715
Sb01g045050 Sorghum bicolor Sb01g045050 N 0.714
Sb02g042760 Sorghum bicolor Sb02g042760 I 0.704
Sb03g012890 Sorghum bicolor Sb03g012890 I 0.694
SELMODRAFT_17703 Selaginella moellendorffii SELMODRAFT_17703 I 0.687
SELMODRAFT_73134 Selaginella moellendorffii SELMODRAFT_73134 I 0.687
SELMODRAFT_73164 Selaginella moellendorffii SELMODRAFT_73164 I 0.678
SELMODRAFT_73169 Selaginella moellendorffii SELMODRAFT_73169 I 0.678
Si002845m.g Setaria italica Si002845m.g I 0.694
Si031079m.g Setaria italica Si031079m.g I 0.706
Si036118m.g Setaria italica Si036118m.g I 0.733
Si038911m.g Setaria italica Si038911m.g I 0.680
TCM_020871 Theobroma cacao TCM_020871 I 0.688
TCM_026233 Theobroma cacao TCM_026233 I 0.706
TCM_026234 Theobroma cacao TCM_026234 I 0.684
TRAES3BF171600010CFD_g Triticum aestivum TRAES3BF171600010CFD_g I 0.694
Traes_2BL_0B09B840B Triticum aestivum Traes_2BL_0B09B840B I 0.690
Traes_4AS_8A64DBE8E Triticum aestivum Traes_4AS_8A64DBE8E I 0.728
Traes_4BL_7EC2BFC7B Triticum aestivum Traes_4BL_7EC2BFC7B I 0.765
Traes_5BL_98D063967 Triticum aestivum Traes_5BL_98D063967 I 0.694
Traes_5DL_41E3B1B23 Triticum aestivum Traes_5DL_41E3B1B23 I 0.694
TRIUR3_28710 Triticum urartu TRIUR3_28710 I 0.687
VIT_05s0049g00510 Vitis vinifera VIT_05s0049g00510 I 0.687
VIT_14s0081g00730 Vitis vinifera VIT_14s0081g00730 I 0.682