ORUFI02G29230 (Oryza rufipogon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 ORUFI02G29230 T003994_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1G
M01635_2.00 		Oryza sativa
NYGCCGACAN
NTGTCGGCRN		 PBM
Weirauch et al.(2014)
pTH8352 		0.857 1.000
DREB1G
M09707_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1G_01 		0.857 1.000
DREB1E
M09709_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1E_01 		0.808 0.940
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.750 0.820
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.750 0.820
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.750 0.820
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.750 0.820
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.715 0.760
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.715 0.760
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.715 0.760
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.714 0.800
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.714 0.800
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.686 0.720
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.686 0.720
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.686 0.720
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.686 0.720
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.686 0.720
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.686 0.720
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI02G29230.1 AP2 53 104

Links

Other AP2 family TFs
Other Oryza rufipogon TFs

148 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R001646 Aptenodytes forsteri Afo_R001646 N
ENSAMEG00000004093 Ailuropoda melanoleuca ENSAMEG00000004093 N
TTF1 Bos taurus ENSBTAG00000018710 N
TTF1 Canis familiaris ENSCAFG00000019895 N
TTF1 Callithrix jacchus ENSCJAG00000018230 N
ENSCPOG00000021944 Cavia porcellus ENSCPOG00000021944 N
ENSCSAG00000014926 Chlorocebus sabaeus ENSCSAG00000014926 N
TTF1 Dasypus novemcinctus ENSDNOG00000014161 N
ENSDORG00000005337 Dipodomys ordii ENSDORG00000005337 N
ENSECAG00000026979 Equus caballus ENSECAG00000026979 N
TTF1 Felis catus ENSFCAG00000007103 N
TTF1 Homo sapiens ENSG00000125482 N
TTF1 Gorilla gorilla ENSGGOG00000008285 N
TTF1 Loxodonta africana ENSLAFG00000001119 N
ENSMEUG00000009905 Macropus eugenii ENSMEUG00000009905 N
TTF1 Myotis lucifugus ENSMLUG00000004861 N
TTF1 Macaca mulatta ENSMMUG00000006833 N
TTF1 Monodelphis domestica ENSMODG00000012538 N
ENSMPUG00000012536 Mustela putorius furo ENSMPUG00000012536 N
ENSNLEG00000012847 Nomascus leucogenys ENSNLEG00000012847 N
ENSOANG00000019813 Ornithorhynchus anatinus ENSOANG00000019813 N
ENSOARG00000006189 Ovis aries ENSOARG00000006189 N
TTF1 Oryctolagus cuniculus ENSOCUG00000005633 N
TTF1 Otolemur garnettii ENSOGAG00000009611 N
TTF1 Ochotona princeps ENSOPRG00000007202 N
ENSP00000333920 Macaca fascicularis ENSP00000333920 N
ENSP00000333920-D1 Bos grunniens ENSP00000333920-D1 N
TTF1 Procavia capensis ENSPCAG00000013797 N
ENSPPYG00000019709 Pongo abelii ENSPPYG00000019709 N
TTF1 Pan troglodytes ENSPTRG00000021496 N
TTF1 Pteropus vampyrus ENSPVAG00000002038 N
Ttf1 Rattus norvegicus ENSRNOG00000039777 N
ENSSHAG00000018686 Sarcophilus harrisii ENSSHAG00000018686 N
ENSSTOG00000007957 Ictidomys tridecemlineatus ENSSTOG00000007957 N
ENSTSYG00000012768 Tarsius syrichta ENSTSYG00000012768 N
TTF1 Tursiops truncatus ENSTTRG00000014081 N
Myotis_brandtii_TTF1_10010133 Myotis brandtii Myotis_brandtii_TTF1_10010133 N