TCM_012330 (Theobroma cacao)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 TCM_012330 T005591_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.700 0.583
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.698 0.583
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.698 0.583
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.694 0.562
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.694 0.562
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.694 0.562
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.692 0.562
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.692 0.562
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY21014 AP2 80 130

Links

Other AP2 family TFs
Other Theobroma cacao TFs

183 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27904.m000217 Ricinus communis 27904.m000217 I 0.690
29983.m003147 Ricinus communis 29983.m003147 I 0.688
30190.m011321 Ricinus communis 30190.m011321 I 0.689
AMTR_s00115p00032780 Amborella trichopoda AMTR_s00115p00032780 I 0.690
Aquca_022_00029 Aquilegia coerulea Aquca_022_00029 I 0.685
Aquca_036_00070 Aquilegia coerulea Aquca_036_00070 I 0.689
ESR2 Arabidopsis thaliana AT1G24590 I 0.681
ERF4 Arabidopsis thaliana AT3G15210 D 0.694
ERF9 Arabidopsis thaliana AT5G44210 D 0.698
BGIOSGA004611 Oryza indica BGIOSGA004611 I 0.692
BGIOSGA017796 Oryza indica BGIOSGA017796 I 0.680
BGIOSGA019701 Oryza indica BGIOSGA019701 I 0.686
Bo1g123160 Brassica oleracea Bo1g123160 I 0.681
Bo2g122260 Brassica oleracea Bo2g122260 I 0.701
Bo3g066710 Brassica oleracea Bo3g066710 I 0.683
Bo5g123710 Brassica oleracea Bo5g123710 I 0.703
Bo5g127380 Brassica oleracea Bo5g127380 I 0.681
Bostr.15697s0023 Boechera stricta Bostr.15697s0023 I 0.681
Bostr.28625s0184 Boechera stricta Bostr.28625s0184 I 0.683
Bostr.3148s0037 Boechera stricta Bostr.3148s0037 I 0.698
Bra001588 Brassica rapa Bra001588 I 0.683
Bra006325 Brassica rapa Bra006325 I 0.705
Bra015266 Brassica rapa Bra015266 I 0.689
Bra021200 Brassica rapa Bra021200 I 0.681
Bra022176 Brassica rapa Bra022176 I 0.681
Bra027270 Brassica rapa Bra027270 I 0.681
Bra036016 Brassica rapa Bra036016 I 0.701
BRADI2G21060 Brachypodium distachyon BRADI2G21060 I 0.682
BRADI2G27920 Brachypodium distachyon BRADI2G27920 I 0.686
BRADI2G52370 Brachypodium distachyon BRADI2G52370 I 0.692
Cagra.0381s0006 Capsella grandiflora Cagra.0381s0006 I 0.685
Cagra.0897s0005 Capsella grandiflora Cagra.0897s0005 I 0.706
Cagra.1613s0010 Capsella grandiflora Cagra.1613s0010 I 0.681
Cagra.2231s0001 Capsella grandiflora Cagra.2231s0001 I 0.681
Carubv10011371m.g Capsella rubella Carubv10011371m.g I 0.706
Carubv10012164m.g Capsella rubella Carubv10012164m.g I 0.681
Carubv10012513m.g Capsella rubella Carubv10012513m.g I 0.681
Carubv10014552m.g Capsella rubella Carubv10014552m.g I 0.685
Carubv10027246m.g Capsella rubella Carubv10027246m.g I 0.685
cassava1589.valid.m1 Manihot esculenta cassava1589.valid.m1 I 0.700
cassava20937.m1 Manihot esculenta cassava20937.m1 I 0.689
cassava37846.valid.m1 Manihot esculenta cassava37846.valid.m1 I 0.690
cassava46560.m1 Manihot esculenta cassava46560.m1 I 0.688
Ca_00327 Cicer arietinum Ca_00327 I 0.693
Ca_11261 Cicer arietinum Ca_11261 I 0.682
Ca_22534 Cicer arietinum Ca_22534 I 0.691
chr6.CM0114.120.nc Lotus japonicus chr6.CM0114.120.nc I 0.700
Ciclev10009484m.g Citrus clementina Ciclev10009484m.g I 0.690
Ciclev10016276m.g Citrus clementina Ciclev10016276m.g I 0.689
Ciclev10016463m.g Citrus clementina Ciclev10016463m.g I 0.689
Cla002268 Citrullus lanatus Cla002268 I 0.693
Cla020000 Citrullus lanatus Cla020000 I 0.682
Cla023722 Citrullus lanatus Cla023722 I 0.704
Cucsa.046390 Cucumis sativus Cucsa.046390 I 0.684
Cucsa.122930 Cucumis sativus Cucsa.122930 I 0.694
Cucsa.126880 Cucumis sativus Cucsa.126880 I 0.679
Cucsa.195660 Cucumis sativus Cucsa.195660 I 0.693
ERF4_TOBAC Nicotiana tabacum ERF4_TOBAC D 0.700
Eucgr.B00720 Eucalyptus grandis Eucgr.B00720 I 0.694
Eucgr.F01164 Eucalyptus grandis Eucgr.F01164 I 0.702
evm.TU.supercontig_131.83 Carica papaya evm.TU.supercontig_131.83 I 0.690
evm.TU.supercontig_27.16 Carica papaya evm.TU.supercontig_27.16 I 0.689
evm.TU.supercontig_83.80 Carica papaya evm.TU.supercontig_83.80 I 0.698
ERF9 Arabidopsis lyrata fgenesh2_kg.8__388__AT5G44210.1 I 0.698
gene00975-v1.0-hybrid Fragaria vesca gene00975-v1.0-hybrid I 0.679
gene29738-v1.0-hybrid Fragaria vesca gene29738-v1.0-hybrid I 0.689
GLYMA06G35710 Glycine max GLYMA06G35710 I 0.701
GLYMA12G26836 Glycine max GLYMA12G26836 I 0.690
GLYMA12G35550 Glycine max GLYMA12G35550 I 0.701
GLYMA13G30990 Glycine max GLYMA13G30990 I 0.689
GLYMA13G34920 Glycine max GLYMA13G34920 I 0.701
GLYMA15G08370 Glycine max GLYMA15G08370 I 0.688
Gorai.002G067600 Gossypium raimondii Gorai.002G067600 I 0.690
Gorai.005G200200 Gossypium raimondii Gorai.005G200200 I 0.689
Gorai.006G088000 Gossypium raimondii Gorai.006G088000 I 0.689
Gorai.008G286700 Gossypium raimondii Gorai.008G286700 I 0.715
Gorai.009G375700 Gossypium raimondii Gorai.009G375700 I 0.690
Gorai.010G155900 Gossypium raimondii Gorai.010G155900 I 0.689
Gorai.010G256600 Gossypium raimondii Gorai.010G256600 I 0.693
Gorai.011G029800 Gossypium raimondii Gorai.011G029800 I 0.689
GRMZM2G131281 Zea mays GRMZM2G131281 I 0.704
GRMZM2G132185 Zea mays GRMZM2G132185 I 0.692
GRMZM2G310368 Zea mays GRMZM2G310368 I 0.694
GSMUA_Achr11G15810_001 Musa acuminata GSMUA_Achr11G15810_001 I 0.683
GSMUA_Achr3G08180_001 Musa acuminata GSMUA_Achr3G08180_001 I 0.698
GSMUA_Achr4G23620_001 Musa acuminata GSMUA_Achr4G23620_001 I 0.685
GSMUA_Achr4G33270_001 Musa acuminata GSMUA_Achr4G33270_001 I 0.683
GSMUA_Achr6G00250_001 Musa acuminata GSMUA_Achr6G00250_001 I 0.683
GSMUA_Achr7G00350_001 Musa acuminata GSMUA_Achr7G00350_001 I 0.681
GSMUA_Achr8G03550_001 Musa acuminata GSMUA_Achr8G03550_001 I 0.690
GSMUA_Achr8G15830_001 Musa acuminata GSMUA_Achr8G15830_001 I 0.684
GSMUA_Achr8G33590_001 Musa acuminata GSMUA_Achr8G33590_001 I 0.679
GSMUA_Achr9G11480_001 Musa acuminata GSMUA_Achr9G11480_001 I 0.692
LPERR01G29260 Leersia perrieri LPERR01G29260 I 0.692
LPERR05G17480 Leersia perrieri LPERR05G17480 I 0.680
Lus10015415.g Linum usitatissimum Lus10015415.g I 0.689
Lus10033664.g Linum usitatissimum Lus10033664.g I 0.702
Lus10039857.g Linum usitatissimum Lus10039857.g I 0.678
MDP0000324718 Malus domestica MDP0000324718 I 0.688
MDP0000868587 Malus domestica MDP0000868587 I 0.691
mgf019214m Mimulus guttatus mgf019214m I 0.689
mgf019807m Mimulus guttatus mgf019807m I 0.681
MLOC_24530 Hordeum vulgare MLOC_24530 I 0.704
MLOC_64636 Hordeum vulgare MLOC_64636 I 0.686
MLOC_73358 Hordeum vulgare MLOC_73358 I 0.682
MTR_2g014340 Medicago truncatula MTR_2g014340 I 0.685
MTR_2g078680 Medicago truncatula MTR_2g078680 I 0.688
MTR_4g078710 Medicago truncatula MTR_4g078710 I 0.682
OB01G42720 Oryza brachyantha OB01G42720 I 0.692
OB05G21350 Oryza brachyantha OB05G21350 I 0.686
OBART01G33870 Oryza barthii OBART01G33870 I 0.692
OBART05G21580 Oryza barthii OBART05G21580 I 0.680
OGLUM01G38110 Oryza glumaepatula OGLUM01G38110 I 0.692
OGLUM05G14230 Oryza glumaepatula OGLUM05G14230 I 0.686
OGLUM05G22790 Oryza glumaepatula OGLUM05G22790 I 0.680
OLONG_021733 Oryza longistaminata OLONG_021733 I 0.692
OMERI01G30710 Oryza meridionalis OMERI01G30710 I 0.692
OMERI05G19490 Oryza meridionalis OMERI05G19490 I 0.680
ONIVA01G38670 Oryza nivara ONIVA01G38670 I 0.692
ONIVA05G14090 Oryza nivara ONIVA05G14090 I 0.686
ONIVA05G22270 Oryza nivara ONIVA05G22270 I 0.680
OPUNC01G32930 Oryza punctata OPUNC01G32930 I 0.692
OPUNC05G11600 Oryza punctata OPUNC05G11600 I 0.686
OPUNC05G19230 Oryza punctata OPUNC05G19230 I 0.680
orange1.1g026240m.g Citrus sinensis orange1.1g026240m.g I 0.689
orange1.1g028454m.g Citrus sinensis orange1.1g028454m.g I 0.690
ORGLA01G0278100 Oryza glaberrima ORGLA01G0278100 I 0.692
ORGLA05G0114900 Oryza glaberrima ORGLA05G0114900 I 0.686
ORGLA05G0187600 Oryza glaberrima ORGLA05G0187600 I 0.680
ORUFI01G37120 Oryza rufipogon ORUFI01G37120 I 0.692
ORUFI05G14490 Oryza rufipogon ORUFI05G14490 I 0.686
ORUFI05G22850 Oryza rufipogon ORUFI05G22850 I 0.680
OS01G0797600 Oryza sativa OS01G0797600 I 0.692
OS05G0361700 Oryza sativa OS05G0361700 I 0.686
OS05G0497300 Oryza sativa OS05G0497300 I 0.680
Pavir.Ca01358 Panicum virgatum Pavir.Ca01358 I 0.682
Pavir.Ea03147 Panicum virgatum Pavir.Ea03147 I 0.692
Pavir.Eb03458 Panicum virgatum Pavir.Eb03458 I 0.692
Pavir.Fa01728 Panicum virgatum Pavir.Fa01728 I 0.680
Pavir.Fb00951 Panicum virgatum Pavir.Fb00951 I 0.680
Pavir.J14354 Panicum virgatum Pavir.J14354 I 0.681
PGSC0003DMG400012828 Solanum tuberosum PGSC0003DMG400012828 I 0.681
PGSC0003DMG400013744 Solanum tuberosum PGSC0003DMG400013744 I 0.687
PGSC0003DMG400022823 Solanum tuberosum PGSC0003DMG400022823 I 0.689
PGSC0003DMG400026821 Solanum tuberosum PGSC0003DMG400026821 I 0.700
PK02602.1 Cannabis sativa PK02602.1 I 0.700
PK19363.1 Cannabis sativa PK19363.1 D 0.692
Pm011391 Prunus mume Pm011391 I 0.688
POPTR_0001s40770 Populus trichocarpa POPTR_0001s40770 I 0.691
POPTR_0004s04720 Populus trichocarpa POPTR_0004s04720 I 0.700
POPTR_0011s05580 Populus trichocarpa POPTR_0011s05580 I 0.689
POPTR_0011s11620 Populus trichocarpa POPTR_0011s11620 I 0.691
POPTR_0017s04540 Populus trichocarpa POPTR_0017s04540 I 0.677
PRUPE_ppa010982mg Prunus persica PRUPE_ppa010982mg I 0.688
Q84LQ6_SOLLC Solanum lycopersicum Q84LQ6_SOLLC I 0.689
Q84XB1_SOLLC Solanum lycopersicum Q84XB1_SOLLC I 0.689
SapurV1A.0012s0580 Salix purpurea SapurV1A.0012s0580 I 0.700
SapurV1A.0032s0470 Salix purpurea SapurV1A.0032s0470 I 0.691
SapurV1A.1244s0010 Salix purpurea SapurV1A.1244s0010 I 0.702
SapurV1A.1325s0040 Salix purpurea SapurV1A.1325s0040 I 0.691
SapurV1A.2062s0030 Salix purpurea SapurV1A.2062s0030 I 0.677
SapurV1A.3143s0020 Salix purpurea SapurV1A.3143s0020 I 0.691
Sb02g029550 Sorghum bicolor Sb02g029550 I 0.704
Sb03g037080 Sorghum bicolor Sb03g037080 I 0.692
ERF10 Arabidopsis lyrata scaffold_100331.1 I 0.692
DRNL Arabidopsis lyrata scaffold_103004.1 I 0.681
ATERF-4 Arabidopsis lyrata scaffold_301765.1 I 0.694
Si002729m.g Setaria italica Si002729m.g I 0.692
Si023088m.g Setaria italica Si023088m.g I 0.680
Si030810m.g Setaria italica Si030810m.g I 0.702
Solyc07g053740.1 Solanum lycopersicum Solyc07g053740.1 I 0.689
Solyc10g009110.1 Solanum lycopersicum Solyc10g009110.1 I 0.689
TCM_008162 Theobroma cacao TCM_008162 I 0.689
TCM_029820 Theobroma cacao TCM_029820 I 0.700
TCM_031608 Theobroma cacao TCM_031608 I 0.690
Thhalv10003431m.g Eutrema salsugineum Thhalv10003431m.g I 0.692
Thhalv10009647m.g Eutrema salsugineum Thhalv10009647m.g I 0.691
Thhalv10012016m.g Eutrema salsugineum Thhalv10012016m.g I 0.726
Thhalv10021456m.g Eutrema salsugineum Thhalv10021456m.g I 0.685
TRAES3BF075600050CFD_g Triticum aestivum TRAES3BF075600050CFD_g I 0.703
VIT_10s0003g00140 Vitis vinifera VIT_10s0003g00140 I 0.691
VIT_12s0028g03270 Vitis vinifera VIT_12s0028g03270 I 0.690
VIT_19s0014g02240 Vitis vinifera VIT_19s0014g02240 I 0.692