VIT_06s0004g00490 (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_06s0004g00490 T006045_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.783 0.941
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.783 0.941
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_06s0004g00490.t01 AP2 34 85

Links

Other AP2 family TFs
Other Vitis vinifera TFs

200 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA033132 Oryza indica BGIOSGA033132 N 0.000
BRADI3G54817 Brachypodium distachyon BRADI3G54817 N 0.000
Gorai.004G221300 Gossypium raimondii Gorai.004G221300 N 0.000
GRMZM2G062009 Zea mays GRMZM2G062009 N 0.000
GSMUA_Achr1G20530_001 Musa acuminata GSMUA_Achr1G20530_001 N 0.000
GSMUA_Achr5G18670_001 Musa acuminata GSMUA_Achr5G18670_001 N 0.000
GSMUA_AchrUn_randomG02760_001 Musa acuminata GSMUA_AchrUn_randomG02760_001 N 0.000
LPERR10G09740 Leersia perrieri LPERR10G09740 N 0.000
Lus10022915.g Linum usitatissimum Lus10022915.g N 0.000
OB0039G10090 Oryza brachyantha OB0039G10090 N 0.000
OBART10G13230 Oryza barthii OBART10G13230 N 0.000
OGLUM10G13040 Oryza glumaepatula OGLUM10G13040 N 0.000
OLONG_025417 Oryza longistaminata OLONG_025417 N 0.000
OMERI10G10050 Oryza meridionalis OMERI10G10050 N 0.000
OPUNC10G11640 Oryza punctata OPUNC10G11640 N 0.000
ORUFI10G14000 Oryza rufipogon ORUFI10G14000 N 0.000
OS10G0477600 Oryza sativa OS10G0477600 N 0.000
Pavir.Ib03261 Panicum virgatum Pavir.Ib03261 N 0.000
Pavir.J11268 Panicum virgatum Pavir.J11268 N 0.000
Si036835m.g Setaria italica Si036835m.g N 0.000