27446.m000475 (Ricinus communis)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 27446.m000475 T006672_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.677 0.725
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.677 0.725
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
27446.m000475 AP2 152 203

Links

Other AP2 family TFs
Other Ricinus communis TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LEC2 Arabidopsis thaliana AT1G28300 D 0.000
Bo5g055730 Brassica oleracea Bo5g055730 I 0.000
Bostr.15697s0149 Boechera stricta Bostr.15697s0149 I 0.000
Bra030087 Brassica rapa Bra030087 N 0.000
Bra032890 Brassica rapa Bra032890 N 0.000
Cagra.1822s0032 Capsella grandiflora Cagra.1822s0032 I 0.000
Carubv10010882m.g Capsella rubella Carubv10010882m.g I 0.000
LEC2 Arabidopsis lyrata fgenesh2_kg.1__2994__AT1G28300.1 I 0.000
Gorai.006G087600 Gossypium raimondii Gorai.006G087600 I 0.000
SapurV1A.0032s0310 Salix purpurea SapurV1A.0032s0310 N 0.000
Thhalv10009849m.g Eutrema salsugineum Thhalv10009849m.g I 0.000