cassava14392.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava14392.m1 T006804_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.817 0.880
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.804 0.860
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.804 0.860
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.693 0.680
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.679 0.760
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.679 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava14392.m1 AP2 134 185

Links

Other AP2 family TFs
Other Manihot esculenta TFs

449 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL001428 Aedes aegypti AAEL001428 I
AALB005115 Anopheles albimanus AALB005115 I
AARA008036 Anopheles arabiensis AARA008036 I
AATE001925 Anopheles atroparvus AATE001925 I
ACHR004688 Anopheles christyi ACHR004688 I
ACOM025686 Anopheles coluzzii ACOM025686 I
ACUA018337 Anopheles culicifacies ACUA018337 I
ADAC002255 Anopheles darlingi ADAC002255 I
ADIR007247 Anopheles dirus ADIR007247 I
AEPI009203 Anopheles epiroticus AEPI009203 I
AFAF013289 Anopheles farauti AFAF013289 I
AFUN009268 Anopheles funestus AFUN009268 I
AGAP007450 Anopheles gambiae AGAP007450 I
AMEC000625 Anopheles melas AMEC000625 I
AMEM007511 Anopheles merus AMEM007511 I
AMIN010454 Anopheles minimus AMIN010454 I
AQUA004460 Anopheles quadriannulatus AQUA004460 I
ASIS014948 Anopheles sinensis ASIS014948 I
ASTEI01378 Anopheles stephensi ASTEI01378 I
CPIJ017595 Culex quinquefasciatus CPIJ017595 I
CpipJ_CPIJ017595 Culex pipiens CpipJ_CPIJ017595 I
ENSONIG00000002623 Oreochromis niloticus ENSONIG00000002623 I
hey1 Oryzias latipes ENSORLG00000012953 I
ENSPFOG00000014160 Poecilia formosa ENSPFOG00000014160 I
ENSXMAG00000003593 Xiphophorus maculatus ENSXMAG00000003593 I
Hey Drosophila melanogaster FBgn0027788 D
GA10830 Drosophila pseudoobscura FBgn0070886 I
GF11221 Drosophila ananassae FBgn0088261 I
GG10686 Drosophila erecta FBgn0102992 I
GH19996 Drosophila grimshawi FBgn0127460 I
GI19174 Drosophila mojavensis FBgn0141913 I
GL10603 Drosophila persimilis FBgn0148213 I
GM20733 Drosophila sechellia FBgn0175614 I
GD10199 Drosophila simulans FBgn0181974 I
GD10200 Drosophila simulans FBgn0181975 I
GK21562 Drosophila willistoni FBgn0223554 I
GE23399 Drosophila yakuba FBgn0240591 I
LCUP005888 Lucilia cuprina LCUP005888 I
LLOJ002069 Lutzomyia longipalpis LLOJ002069 I
MDOA011625 Musca domestica MDOA011625 I