cassava15834.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava15834.m1 T006812_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF7
M01617_2.00 		Arabidopsis thaliana
NGCCGNMNNN
NNNKNCGGCN		 PBM
Weirauch et al.(2014)
pTH7606 		0.710 0.880
ERF7
M06620_2.00 		Arabidopsis thaliana
YHNHYNYYDYCDCCGCCGYCD
HGRCGGCGGHGRHRRNRDNDR		 Dap-seq
OMalley et al.(2016)
ERF7_col_a 		0.710 0.880
ERF7
M06621_2.00 		Arabidopsis thaliana
NNNHNNHNHHDSCGCCGCCRH
DYGGCGGCGSHDDNDNNDNNN		 Dap-seq
OMalley et al.(2016)
ERF7_colamp_a 		0.710 0.880
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava15834.m1 AP2 38 89

Links

Other AP2 family TFs
Other Manihot esculenta TFs

36 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A1O1_09292 Capronia coronata A1O1_09292 N
A1O3_04668 Capronia epimyces A1O3_04668 N
A1O5_10885 Cladophialophora psammophila A1O5_10885 N
A1O7_09090 Cladophialophora yegresii A1O7_09090 N
A1O9_10446 Exophiala aquamarina A1O9_10446 N
G647_08050 Cladophialophora carrionii G647_08050 N
HMPREF1120_01469 Exophiala dermatitidis HMPREF1120_01469 N
PV04_09680 Capronia semiimmersa PV04_09680 N
PV05_00085 Exophiala xenobiotica PV05_00085 N
PV07_00036 Cladophialophora immunda PV07_00036 N
PV08_02169 Exophiala spinifera PV08_02169 N
PV10_04737 Exophiala mesophila PV10_04737 N
PV11_03405 Exophiala sideris PV11_03405 N
Z517_01937 Fonsecaea pedrosoi Z517_01937 N
Z518_03437 Rhinocladiella mackenziei Z518_03437 N
Z519_11424 Cladophialophora bantiana Z519_11424 N