cassava43608.valid.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava43608.valid.m1 T006943_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF023
M06560_2.00 		Arabidopsis thaliana
DYCACCGACANHDNN
NNHDNTGTCGGTGRH		 Dap-seq
OMalley et al.(2016)
AT1G01250_col_a 		0.758 0.900
ERF023
M06561_2.00 		Arabidopsis thaliana
HHNHHDHCACCGACA
TGTCGGTGDHDDNDD		 Dap-seq
OMalley et al.(2016)
AT1G01250_colamp_a 		0.758 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava43608.valid.m1 AP2 34 85

Links

Other AP2 family TFs
Other Manihot esculenta TFs

46 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AALB010330 Anopheles albimanus AALB010330 I 0.000
Aan_R013029 Calypte anna Aan_R013029 I 0.000
AARA002865 Anopheles arabiensis AARA002865 I 0.000
AATE014419 Anopheles atroparvus AATE014419 I 0.000
ACEP22947 Atta cephalotes ACEP22947 I 0.000
ACHR004409 Anopheles christyi ACHR004409 I 0.000
ACOM041529 Anopheles coluzzii ACOM041529 I 0.000
ACUA010350 Anopheles culicifacies ACUA010350 I 0.000
ACYPI007722 Acyrthosiphon pisum ACYPI007722 I 0.000
ADAC003479 Anopheles darlingi ADAC003479 I 0.000
AEPI003553 Anopheles epiroticus AEPI003553 I 0.000
AFAF000230 Anopheles farauti AFAF000230 I 0.000
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.000
Afo_R012023 Aptenodytes forsteri Afo_R012023 I 0.000
AFUN004906 Anopheles funestus AFUN004906 I 0.000
Alligator_sinensis_CCG000393.1 Alligator sinensis Alligator_sinensis_CCG000393.1 I 0.000
Alligator_sinensis_CCG017609.1 Alligator sinensis Alligator_sinensis_CCG017609.1 I 0.000
AMEC016105 Anopheles melas AMEC016105 I 0.000
AMEM017983 Anopheles merus AMEM017983 I 0.000
AQUA007473 Anopheles quadriannulatus AQUA007473 I 0.000
ASIS004664 Anopheles sinensis ASIS004664 I 0.000
ASTEI06456 Anopheles stephensi ASTEI06456 I 0.000
BGIBMGA011565 Bombyx mori BGIBMGA011565 I 0.000
BGLB009291 Biomphalaria glabrata BGLB009291 I 0.000
Brh_R001594 Buceros rhinoceros Brh_R001594 I 0.000
Brh_R003197 Buceros rhinoceros Brh_R003197 I 0.000
BTMF_0000130101 Brugia timori BTMF_0000130101 I 0.000
Cflo_00077--XP_394171.3_APIME Camponotus floridanus Cflo_00077--XP_394171.3_APIME I 0.000
Cmyd_10009821 Chelonia mydas Cmyd_10009821 I 0.000
csin100403 Clonorchis sinensis csin100403 N 0.000
DILT_0000082701 Diphyllobothrium latum DILT_0000082701 I 0.000
ENSACAG00000003097 Anolis carolinensis ENSACAG00000003097 I 0.000
ENSACAG00000010823 Anolis carolinensis ENSACAG00000010823 I 0.000
ENSAMEG00000006442 Ailuropoda melanoleuca ENSAMEG00000006442 I 0.000
ENSAMXG00000001200 Astyanax mexicanus ENSAMXG00000001200 I 0.000
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.000
EBF3 Bos taurus ENSBTAG00000008272 I 0.000
ENSBTAP00000053340-D1 Bos grunniens ENSBTAP00000053340-D1 I 0.000
EBF3 Canis familiaris ENSCAFG00000013267 I 0.000
EBF1 Callithrix jacchus ENSCJAG00000019016 I 0.000
EBF2 Callithrix jacchus ENSCJAG00000019921 I 0.000
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.000
ENSCSAG00000010520 Chlorocebus sabaeus ENSCSAG00000010520 I 0.000
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.000
EBF3 Dasypus novemcinctus ENSDNOG00000002588 I 0.000
EBF1 Dasypus novemcinctus ENSDNOG00000035396 I 0.000
EBF1 Equus caballus ENSECAG00000007964 I 0.000
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.000
EBF1 Homo sapiens ENSG00000164330 D 0.000
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.000
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.000
EBF2 Gallus gallus ENSGALG00000000242 I 0.000
EBF1 Gorilla gorilla ENSGGOG00000000033 I 0.000
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 0.000
ENSLACG00000005494 Latimeria chalumnae ENSLACG00000005494 I 0.000
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.000
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.000
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.000
ENSMGAG00000016563 Meleagris gallopavo ENSMGAG00000016563 I 0.000
ENSMLUG00000004376 Myotis lucifugus ENSMLUG00000004376 I 0.000
EBF3 Myotis lucifugus ENSMLUG00000005478 I 0.000
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.000
EBF4 Macaca mulatta ENSMMUG00000021331 I 0.000
EBF1 Macaca mulatta ENSMMUG00000021696 I 0.000
ENSMMUP00000028570 Macaca fascicularis ENSMMUP00000028570 I 0.000
ENSMPUG00000002449 Mustela putorius furo ENSMPUG00000002449 I 0.000
ENSMPUG00000013414 Mustela putorius furo ENSMPUG00000013414 I 0.000
Ebf4 Mus musculus ENSMUSG00000053552 D 0.000
ENSOANG00000004212 Ornithorhynchus anatinus ENSOANG00000004212 I 0.000
ENSOARG00000012836 Ovis aries ENSOARG00000012836 I 0.000
EBF1 Otolemur garnettii ENSOGAG00000013992 I 0.000
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.000
ENSPANG00000010656 Papio anubis ENSPANG00000010656 I 0.000
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.000
ENSPMAG00000003287 Petromyzon marinus ENSPMAG00000003287 I 0.000
ENSPMAG00000004238 Petromyzon marinus ENSPMAG00000004238 I 0.000
ENSPSIG00000005604 Pelodiscus sinensis ENSPSIG00000005604 I 0.000
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.000
ENSSHAG00000000353 Sarcophilus harrisii ENSSHAG00000000353 I 0.000
ENSSHAG00000018391 Sarcophilus harrisii ENSSHAG00000018391 I 0.000
EBF1 Sus scrofa ENSSSCG00000017046 I 0.000
ENSSTOG00000007966 Ictidomys tridecemlineatus ENSSTOG00000007966 I 0.000
ENSSTOG00000011505 Ictidomys tridecemlineatus ENSSTOG00000011505 I 0.000
ENSSTOG00000016352 Ictidomys tridecemlineatus ENSSTOG00000016352 I 0.000
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.000
EBF1 Tetraodon nigroviridis ENSTNIG00000016148 I 0.000
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.000
ENSXMAG00000010351 Xiphophorus maculatus ENSXMAG00000010351 I 0.000
estExt_gwp.C_3380002 Branchiostoma floridae estExt_gwp.C_3380002 I 0.000
estExt_gwp.C_3810003 Branchiostoma floridae estExt_gwp.C_3810003 I 0.000
GH12956 Drosophila grimshawi FBgn0120434 I 0.000
Gfo_R013267 Geospiza fortis Gfo_R013267 I 0.000
GPLIN_000159400 Globodera pallida GPLIN_000159400 I 0.000
Hba_09581 Heterorhabditis bacteriophora Hba_09581 I 0.000
HelroG112029 Helobdella robusta HelroG112029 I 0.000
HMEL014948 Heliconius melpomene HMEL014948 I 0.000
Hsal_03263--XP_394171.3_APIME Harpegnathos saltator Hsal_03263--XP_394171.3_APIME I 0.000
LCUP013862 Lucilia cuprina LCUP013862 I 0.000
LotgiG225788 Lottia gigantea LotgiG225788 I 0.000
MCINX016126 Melitaea cinxia MCINX016126 I 0.000
MDOA011385 Musca domestica MDOA011385 I 0.000
Myotis_brandtii_Ebf1_10034833 Myotis brandtii Myotis_brandtii_Ebf1_10034833 I 0.000
Myotis_brandtii_EBF2_10005813 Myotis brandtii Myotis_brandtii_EBF2_10005813 I 0.000
Myotis_brandtii_Ebf3_10024819 Myotis brandtii Myotis_brandtii_Ebf3_10024819 I 0.000
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.000
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.000
nRc.2.0.1.g14013 Romanomermis culicivorax nRc.2.0.1.g14013 I 0.000
Ocbimv22038949m.g Octopus bimaculoides Ocbimv22038949m.g I 0.000
OESDEN_10293 Oesophagostomum dentatum OESDEN_10293 I 0.000
OFLC_0000294401 Onchocerca flexuosa OFLC_0000294401 I 0.000
Ogr00083 Ophisaurus gracilis Ogr00083 I 0.000
Ppa-unc-3 Pristionchus pacificus PPA20518 I 0.000
Pvit_11383 Pogona vitticeps Pvit_11383 I 0.000
Pvit_12046 Pogona vitticeps Pvit_12046 I 0.000
Pvit_12666 Pogona vitticeps Pvit_12666 I 0.000
Sakowv30011033m.g Saccoglossus kowalevskii Sakowv30011033m.g I 0.000
scaffold24-EXSNAP2012.58 Pristionchus exspectatus scaffold24-EXSNAP2012.58 I 0.000
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.000
T265_13606 Opisthorchis viverrini T265_13606 N 0.000
Tal_R004164 Tyto alba Tal_R004164 I 0.000
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.000
ebf2.S Xenopus laevis XB-GENE-971141 I 0.000
YQE_08127 Dendroctonus ponderosae YQE_08127 I 0.000