cassava47343.m1 (Manihot esculenta)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 cassava47343.m1 T006959_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
cassava47343.m1 AP2 43 94

Links

Other AP2 family TFs
Other Manihot esculenta TFs

98 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30068.m002623 Ricinus communis 30068.m002623 I 0.743
30174.m008961 Ricinus communis 30174.m008961 I 0.715
AMTR_s00003p00165930 Amborella trichopoda AMTR_s00003p00165930 I 0.700
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.719
AMTR_s00069p00132820 Amborella trichopoda AMTR_s00069p00132820 I 0.716
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.677
Aquca_013_00424 Aquilegia coerulea Aquca_013_00424 I 0.692
BGIOSGA031114 Oryza indica BGIOSGA031114 I 0.706
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.696
cassava1773.valid.m1 Manihot esculenta cassava1773.valid.m1 I 0.677
cassava28630.m1 Manihot esculenta cassava28630.m1 I 0.703
cassava40212.m1 Manihot esculenta cassava40212.m1 I 0.719
cassava4119.m1 Manihot esculenta cassava4119.m1 I 0.678
cassava9303.m1 Manihot esculenta cassava9303.m1 I 0.678
Ca_00417 Cicer arietinum Ca_00417 I 0.755
Ca_16397 Cicer arietinum Ca_16397 I 0.716
Ca_25424 Cicer arietinum Ca_25424 I 0.697
Ciclev10023360m.g Citrus clementina Ciclev10023360m.g I 0.740
Ciclev10023764m.g Citrus clementina Ciclev10023764m.g I 0.719
Ciclev10024614m.g Citrus clementina Ciclev10024614m.g N 0.697
Cla005054 Citrullus lanatus Cla005054 N 0.715
Cla010474 Citrullus lanatus Cla010474 I 0.677
Cla021590 Citrullus lanatus Cla021590 I 0.692
Cucsa.158080 Cucumis sativus Cucsa.158080 I 0.677
Cucsa.193280 Cucumis sativus Cucsa.193280 N 0.715
Cucsa.258020 Cucumis sativus Cucsa.258020 I 0.692
Eucgr.J01042 Eucalyptus grandis Eucgr.J01042 N 0.761
evm.TU.supercontig_18.194 Carica papaya evm.TU.supercontig_18.194 I 0.721
evm.TU.supercontig_62.63 Carica papaya evm.TU.supercontig_62.63 I 0.729
gene01844-v1.0-hybrid Fragaria vesca gene01844-v1.0-hybrid N 0.767
gene16905-v1.0-hybrid Fragaria vesca gene16905-v1.0-hybrid I 0.719
GLYMA03G01931 Glycine max GLYMA03G01931 I 0.716
GLYMA07G08542 Glycine max GLYMA07G08542 I 0.716
GLYMA13G29920 Glycine max GLYMA13G29920 N 0.774
GLYMA15G09190 Glycine max GLYMA15G09190 N 0.774
GLYMA20G03890 Glycine max GLYMA20G03890 N 0.714
Gorai.004G127900 Gossypium raimondii Gorai.004G127900 N 0.785
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.710
Gorai.008G116800 Gossypium raimondii Gorai.008G116800 I 0.719
Gorai.008G261800 Gossypium raimondii Gorai.008G261800 I 0.740
GRMZM2G010100 Zea mays GRMZM2G010100 I 0.677
GRMZM2G018138 Zea mays GRMZM2G018138 I 0.712
GSMUA_Achr3G12350_001 Musa acuminata GSMUA_Achr3G12350_001 I 0.720
LjT06B04.30.nd Lotus japonicus LjT06B04.30.nd N 0.774
LPERR09G12960 Leersia perrieri LPERR09G12960 I 0.682
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.721
Lus10008291.g Linum usitatissimum Lus10008291.g N 0.793
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.733
Lus10036556.g Linum usitatissimum Lus10036556.g I 0.719
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.736
Lus10041372.g Linum usitatissimum Lus10041372.g I 0.723
MDP0000127123 Malus domestica MDP0000127123 N 0.778
MDP0000133476 Malus domestica MDP0000133476 I 0.719
MDP0000138669 Malus domestica MDP0000138669 I 0.719
MDP0000316843 Malus domestica MDP0000316843 N 0.769
mgf018851m Mimulus guttatus mgf018851m I 0.719
mgf024137m Mimulus guttatus mgf024137m N 0.748
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.696
MTR_2g016730 Medicago truncatula MTR_2g016730 N 0.710
MTR_4g082345 Medicago truncatula MTR_4g082345 I 0.698
MTR_7g011630 Medicago truncatula MTR_7g011630 I 0.677
MTR_8g032610 Medicago truncatula MTR_8g032610 I 0.716
OGLUM09G17450 Oryza glumaepatula OGLUM09G17450 I 0.682
OMERI09G12500 Oryza meridionalis OMERI09G12500 I 0.708
ONIVA09G17920 Oryza nivara ONIVA09G17920 I 0.706
OPUNC09G15300 Oryza punctata OPUNC09G15300 I 0.708
orange1.1g016393m.g Citrus sinensis orange1.1g016393m.g I 0.740
orange1.1g037119m.g Citrus sinensis orange1.1g037119m.g I 0.719
ORUFI09G18220 Oryza rufipogon ORUFI09G18220 I 0.708
Pavir.Ba01277 Panicum virgatum Pavir.Ba01277 I 0.718
Pavir.Cb00448 Panicum virgatum Pavir.Cb00448 I 0.677
Pavir.Ia01300 Panicum virgatum Pavir.Ia01300 I 0.677
Pavir.Ib03934 Panicum virgatum Pavir.Ib03934 I 0.677
Pavir.J28133 Panicum virgatum Pavir.J28133 I 0.677
Pavir.J28151 Panicum virgatum Pavir.J28151 I 0.677
PGSC0003DMG400005621 Solanum tuberosum PGSC0003DMG400005621 N 0.758
PGSC0003DMG400017051 Solanum tuberosum PGSC0003DMG400017051 I 0.703
PK25269.1 Cannabis sativa PK25269.1 I 0.725
PK28640.1 Cannabis sativa PK28640.1 I 0.714
Pm008788 Prunus mume Pm008788 I 0.719
POPTR_0001s45740 Populus trichocarpa POPTR_0001s45740 N 0.785
POPTR_0014s07280 Populus trichocarpa POPTR_0014s07280 I 0.719
PRUPE_ppa019500mg Prunus persica PRUPE_ppa019500mg N 0.785
PRUPE_ppa022202mg Prunus persica PRUPE_ppa022202mg I 0.719
SapurV1A.2432s0010 Salix purpurea SapurV1A.2432s0010 I 0.719
Sb01g014810 Sorghum bicolor Sb01g014810 I 0.677
Sb02g030350 Sorghum bicolor Sb02g030350 I 0.712
SELMODRAFT_409196 Selaginella moellendorffii SELMODRAFT_409196 N 0.737
SELMODRAFT_411255 Selaginella moellendorffii SELMODRAFT_411255 N 0.737
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.692
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.692
Si024417m.g Setaria italica Si024417m.g I 0.677
Si032213m.g Setaria italica Si032213m.g I 0.718
Solyc01g091760.2 Solanum lycopersicum Solyc01g091760.2 I 0.703
Solyc03g119800.1 Solanum lycopersicum Solyc03g119800.1 N 0.758
TCM_005425 Theobroma cacao TCM_005425 I 0.719
TCM_015579 Theobroma cacao TCM_015579 I 0.740
VIT_02s0025g03170 Vitis vinifera VIT_02s0025g03170 N 0.764