Cucsa.310360 (Cucumis sativus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cucsa.310360 T007091_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SHN2
M06660_2.00 		Arabidopsis thaliana
DCCDCCRCCDCCDCCRCCRCY
RGYGGYGGHGGHGGYGGHGGH		 Dap-seq
OMalley et al.(2016)
SHN3_col_a 		0.711 0.941
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.688 0.804
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.688 0.804
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cucsa.310360.1 AP2 5 56
Cucsa.310360.2 AP2 1 30

Links

Other AP2 family TFs
Other Cucumis sativus TFs

305 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Sakowv30004832m.g Saccoglossus kowalevskii Sakowv30004832m.g N 0.000
Sakowv30018197m.g Saccoglossus kowalevskii Sakowv30018197m.g N 0.000
Sakowv30023551m.g Saccoglossus kowalevskii Sakowv30023551m.g N 0.000
Sakowv30025602m.g Saccoglossus kowalevskii Sakowv30025602m.g N 0.000