Aquca_122_00012 (Aquilegia coerulea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Aquca_122_00012 T007537_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1D
M06678_2.00 		Arabidopsis thaliana
NHBRCCGACRTNN
NNAYGTCGGYVDN		 Dap-seq
OMalley et al.(2016)
CBF4_col_a 		0.733 0.880
DREB1D
M06679_2.00 		Arabidopsis thaliana
HYRCCGACATND
HNATGTCGGYRD		 Dap-seq
OMalley et al.(2016)
CBF4_colamp_a 		0.733 0.880
DREB1C
M01623_2.00 		Arabidopsis thaliana
RCCGACAT
ATGTCGGY		 PBM
Weirauch et al.(2014)
pTH8187 		0.720 0.820
DREB1C
M06639_2.00 		Arabidopsis thaliana
NNNHBRCCGACATNN
NNATGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF2_col_a 		0.720 0.820
DREB1C
M06640_2.00 		Arabidopsis thaliana
NYBRCCGACATVN
NBATGTCGGYVRN		 Dap-seq
OMalley et al.(2016)
CBF2_colamp_a 		0.720 0.820
DREB1A
M01624_2.00 		Arabidopsis thaliana
NRCCGACNNN
NNNGTCGGYN		 PBM
Weirauch et al.(2014)
pTH8163 		0.698 0.840
DREB1A
M01625_2.00 		Arabidopsis thaliana
NNRCCGACNW
WNGTCGGYNN		 PBM
Weirauch et al.(2014)
pTH9718 		0.698 0.840
DREB1A
M06641_2.00 		Arabidopsis thaliana
HNYBRCCGACDWNN
NNWHGTCGGYVRND		 Dap-seq
OMalley et al.(2016)
CBF3_col_a 		0.698 0.840
DREB1A
M06642_2.00 		Arabidopsis thaliana
YBRCCGACATN
NATGTCGGYVR		 Dap-seq
OMalley et al.(2016)
CBF3_colamp_a 		0.698 0.840
DREB1F
M00962_2.00 		Arabidopsis thaliana
NRCCGACNN
NNGTCGGYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_thaliana 		0.682 0.740
DREB1F
M00840_2.00 		Arabidopsis thaliana
NRYCGACNN
NNGTCGRYN		 PBM
Franco-Zorrilla et al.(2014)
DDF1 		0.682 0.740
DDF1
M00964_2.00 		Arabidopsis lyrata
NRYCGACDY
RHGTCGRYN		 PBM
LehtiShiu et al.(2015)
DDF1_Arabidopsis_lyrata 		0.682 0.740
DREB1F
M06564_2.00 		Arabidopsis thaliana
NHNHYGYCGACATNN
NNATGTCGRCRDNDN		 Dap-seq
OMalley et al.(2016)
DDF1_col_a 		0.682 0.740
DREB1F
M06565_2.00 		Arabidopsis thaliana
HNDNNRYCGACAH
DTGTCGRYNNHND		 Dap-seq
OMalley et al.(2016)
DDF1_colamp_a 		0.682 0.740
DREB1F
M09701_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DREB1F_03 		0.682 0.740
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_122_00012.1 AP2 51 102

Links

Other AP2 family TFs
Other Aquilegia coerulea TFs

103 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL003968 Aedes aegypti AAEL003968 N
AALB008486 Anopheles albimanus AALB008486 N
AARA009005 Anopheles arabiensis AARA009005 N
AATE001469 Anopheles atroparvus AATE001469 N
ACEP19763 Atta cephalotes ACEP19763 N
ACHR004577 Anopheles christyi ACHR004577 N
ACOM027442 Anopheles coluzzii ACOM027442 N
ACYPI001312 Acyrthosiphon pisum ACYPI001312 N
ACYPI004047 Acyrthosiphon pisum ACYPI004047 N
ADAC000396 Anopheles darlingi ADAC000396 N
ADIR009502 Anopheles dirus ADIR009502 N
AEPI007981 Anopheles epiroticus AEPI007981 N
AFAF015825 Anopheles farauti AFAF015825 N
AGAP010700 Anopheles gambiae AGAP010700 N
AMEC018533 Anopheles melas AMEC018533 N
AMEM011057 Anopheles merus AMEM011057 N
AMIN008662 Anopheles minimus AMIN008662 N
Aqu1.227716 Amphimedon queenslandica Aqu1.227716 N
AQUA002391 Anopheles quadriannulatus AQUA002391 N
BGIBMGA000930 Bombyx mori BGIBMGA000930 N
Cflo_07758--XP_396195.2_APIME Camponotus floridanus Cflo_07758--XP_396195.2_APIME N
CLEC009664 Cimex lectularius CLEC009664 N
Cmyd_10005769 Chelonia mydas Cmyd_10005769 N
CPIJ011038 Culex quinquefasciatus CPIJ011038 N
CpipJ_CPIJ011038 Culex pipiens CpipJ_CPIJ011038 N
ENSAMXG00000005709 Astyanax mexicanus ENSAMXG00000005709 N
GB49325 Apis mellifera GB49325 N
HHAL007873-PA Halyomorpha halys HHAL007873-PA N
HHAL009893-PA Halyomorpha halys HHAL009893-PA N
Hsal_10566--XP_396195.2_APIME Harpegnathos saltator Hsal_10566--XP_396195.2_APIME N
KGM_18078 Danaus plexippus KGM_18078 N
LLOJ000827 Lutzomyia longipalpis LLOJ000827 N
MCINX005268 Melitaea cinxia MCINX005268 N
NEMVEDRAFT_v1g226879 Nematostella vectensis NEMVEDRAFT_v1g226879 N
NV15374 Nasonia vitripennis NV15374 N
PPA02259 Pristionchus pacificus PPA02259 N
PPAI003395 Phlebotomus papatasi PPAI003395 N
RPRC004446 Rhodnius prolixus RPRC004446 N
SINV15598 Solenopsis invicta SINV15598 N