CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bostr.25993s0288
(
Boechera stricta
)
AP2
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00847 (AP2)
IPR001471
Bostr.25993s0288
T007615_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ERF106
M01628_2.00
Arabidopsis thaliana
NNNVCRVCN
NGBYGBNNN
PBM
Weirauch et al.(2014)
pTH7426
0.780
0.745
ERF14
M01045_2.00
Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN
PBM
Sullivan et al.(2014)
pTH9793
0.777
0.745
ERF13
M01615_2.00
Arabidopsis thaliana
VGCCGSCD
HGSCGGCB
PBM
Weirauch et al.(2014)
pTH7283
0.770
0.843
ERF13
M06612_2.00
Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN
Dap-seq
OMalley et al.(2016)
ERF13_colamp_a
0.770
0.843
ERF13
M06613_2.00
Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD
Dap-seq
OMalley et al.(2016)
ERF13_col_b
0.770
0.843
ERF095
M06624_2.00
Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR
Dap-seq
OMalley et al.(2016)
ESE1_col_a
0.764
0.745
ERF095
M06625_2.00
Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR
Dap-seq
OMalley et al.(2016)
ESE1_colamp_a
0.764
0.745
ERF104
M06682_2.00
Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN
Dap-seq
OMalley et al.(2016)
ERF104_col_a
0.758
0.725
ERF104
M06683_2.00
Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV
Dap-seq
OMalley et al.(2016)
ERF104_colamp_a
0.758
0.725
ERF1A
M00848_2.00
Arabidopsis thaliana
NNNNRNN
NNYNNNN
PBM
Franco-Zorrilla et al.(2014)
ATERF1
0.752
0.784
ERF1A
M00720_2.00
Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN
PBM
Chang et al.(2013)
pTH7202
0.752
0.784
ERF105
M01632_2.00
Arabidopsis thaliana
CGCCGGCM
KGCCGGCG
PBM
Weirauch et al.(2014)
pTH7233
0.751
0.725
ERF105
M06676_2.00
Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN
Dap-seq
OMalley et al.(2016)
ERF105_colamp_a
0.751
0.725
ERF105
M06677_2.00
Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD
Dap-seq
OMalley et al.(2016)
ERF105_col
0.751
0.725
PK02330.1
M01095_2.00
Cannabis sativa
NNNGCCGBCN
NGVCGGCNNN
PBM
Lambert et al.(2019)
pTH10093
0.746
0.784
ERF2
M01631_2.00
Arabidopsis thaliana
NNNGCCGNCN
NGNCGGCNNN
PBM
Weirauch et al.(2014)
pTH8113
0.735
0.765
ERF2
M06672_2.00
Arabidopsis thaliana
HHNHHNYHDYCGCCGCCRYND
HNRYGGCGGCGRHDRNDDNDD
Dap-seq
OMalley et al.(2016)
ERF2_col_a
0.735
0.765
ERF2
M06673_2.00
Arabidopsis thaliana
NNNNNNNHNNHDSMGCCGCCR
YGGCGGCKSHDNNDNNNNNNN
Dap-seq
OMalley et al.(2016)
ERF2_colamp_a
0.735
0.765
ERF5_TOBAC
M09729_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF4_02
0.734
0.765
ERF096
M01630_2.00
Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN
PBM
Weirauch et al.(2014)
pTH7909
0.724
0.706
ERF5
M00721_2.00
Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN
PBM
Chang et al.(2013)
pTH7197
0.711
0.725
ERF5
M06674_2.00
Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR
Dap-seq
OMalley et al.(2016)
ERF5_col_a
0.711
0.725
ERF5
M06675_2.00
Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN
Dap-seq
OMalley et al.(2016)
ERF5_colamp_a
0.711
0.725
A4F249_TOBAC
M09726_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF2_01
0.702
0.706
ERF1B
M01619_2.00
Arabidopsis thaliana
NMGCCGCCRN
NYGGCGGCKN
PBM
Weirauch et al.(2014)
pTH8795
0.701
0.725
ERF1B
M06626_2.00
Arabidopsis thaliana
NHNNHDYMGCCGCCRYHDNHDNNNNNNN
NNNNNNNHDNHDRYGGCGGCKRHDNNDN
Dap-seq
OMalley et al.(2016)
ERF1_col_a
0.701
0.725
ERF1B
M06627_2.00
Arabidopsis thaliana
MGCCGCCD
HGGCGGCK
Dap-seq
OMalley et al.(2016)
ERF1_colamp_a
0.701
0.725
ERF1B
M09703_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2_01
0.701
0.725
ERF1B
M09704_2.00
Arabidopsis thaliana
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_Q2
0.701
0.725
ERF094
M01602_2.00
Arabidopsis thaliana
VGCCGCCD
HGGCGGCB
PBM
Weirauch et al.(2014)
pTH8276
0.698
0.745
A4F248_TOBAC
M09725_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$WRAF1_01
0.697
0.686
ERF109
M00849_2.00
Arabidopsis thaliana
NGCCGNHNN
NNDNCGGCN
PBM
Franco-Zorrilla et al.(2014)
RRTF1
0.697
0.725
ERF109
M06653_2.00
Arabidopsis thaliana
CKSCGCCGYHWHHNN
NNDDWDRCGGCGSMG
Dap-seq
OMalley et al.(2016)
RRTF1_col_a
0.697
0.725
ERF109
M06654_2.00
Arabidopsis thaliana
HNNHDSCGCCGYHWTHNNN
NNNDAWDRCGGCGSHDNND
Dap-seq
OMalley et al.(2016)
RRTF1_colamp_a
0.697
0.725
ERF2_TOBAC
M09727_2.00
Nicotiana tabacum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF2_01
0.694
0.745
Q2TN80_WHEAT
M09715_2.00
Triticum aestivum
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
P$ERF1_02
0.691
0.647
RAP2-2
M00719_2.00
Arabidopsis thaliana
NNRBYGNN
NNCRVYNN
PBM
Chang et al.(2013)
pTH7227
0.689
0.647
AT2G33710
M01613_2.00
Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN
PBM
Weirauch et al.(2014)
pTH7543
0.684
0.686
AT2G33710
M06606_2.00
Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH
Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a
0.684
0.686
AT2G33710
M06607_2.00
Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN
Dap-seq
OMalley et al.(2016)
At2g33710_col
0.684
0.686
ERF113
M01629_2.00
Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN
PBM
Weirauch et al.(2014)
pTH8097
0.680
0.686
For this family, TFs with SR scores >
0.677
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bostr.25993s0288.1.p
AP2
106
157
QYRGVRRRPWGKFAAEIRDPKKKGARVWLGTYETPEDAAVAYDRAAFQLRGS
Links
Other
AP2
family TFs
Other
Boechera stricta
TFs
1281 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_007350
Trichomonas vaginalis
TVAG_007350
N
TVAG_008200
Trichomonas vaginalis
TVAG_008200
N
TVAG_008370
Trichomonas vaginalis
TVAG_008370
I
TVAG_017810
Trichomonas vaginalis
TVAG_017810
I
TVAG_018140
Trichomonas vaginalis
TVAG_018140
I
TVAG_022950
Trichomonas vaginalis
TVAG_022950
N
TVAG_030320
Trichomonas vaginalis
TVAG_030320
I
TVAG_033530
Trichomonas vaginalis
TVAG_033530
I
TVAG_033770
Trichomonas vaginalis
TVAG_033770
I
TVAG_034560
Trichomonas vaginalis
TVAG_034560
I
TVAG_041220
Trichomonas vaginalis
TVAG_041220
I
TVAG_048500
Trichomonas vaginalis
TVAG_048500
N
TVAG_048830
Trichomonas vaginalis
TVAG_048830
I
TVAG_049600
Trichomonas vaginalis
TVAG_049600
I
TVAG_050010
Trichomonas vaginalis
TVAG_050010
I
TVAG_058550
Trichomonas vaginalis
TVAG_058550
I
TVAG_058570
Trichomonas vaginalis
TVAG_058570
N
TVAG_068520
Trichomonas vaginalis
TVAG_068520
N
TVAG_072910
Trichomonas vaginalis
TVAG_072910
N
TVAG_074130
Trichomonas vaginalis
TVAG_074130
I
TVAG_079810
Trichomonas vaginalis
TVAG_079810
N
TVAG_085400
Trichomonas vaginalis
TVAG_085400
I
TVAG_105110
Trichomonas vaginalis
TVAG_105110
I
TVAG_106110
Trichomonas vaginalis
TVAG_106110
I
TVAG_122130
Trichomonas vaginalis
TVAG_122130
I
TVAG_123330
Trichomonas vaginalis
TVAG_123330
N
TVAG_138190
Trichomonas vaginalis
TVAG_138190
I
TVAG_141020
Trichomonas vaginalis
TVAG_141020
I
TVAG_161450
Trichomonas vaginalis
TVAG_161450
N
TVAG_167420
Trichomonas vaginalis
TVAG_167420
N
TVAG_170760
Trichomonas vaginalis
TVAG_170760
I
TVAG_170790
Trichomonas vaginalis
TVAG_170790
I
TVAG_179440
Trichomonas vaginalis
TVAG_179440
I
TVAG_181200
Trichomonas vaginalis
TVAG_181200
I
TVAG_187200
Trichomonas vaginalis
TVAG_187200
I
TVAG_187270
Trichomonas vaginalis
TVAG_187270
N
TVAG_194980
Trichomonas vaginalis
TVAG_194980
I
TVAG_200950
Trichomonas vaginalis
TVAG_200950
I
TVAG_203070
Trichomonas vaginalis
TVAG_203070
N
TVAG_203550
Trichomonas vaginalis
TVAG_203550
I
TVAG_207810
Trichomonas vaginalis
TVAG_207810
N
TVAG_208090
Trichomonas vaginalis
TVAG_208090
I
TVAG_208170
Trichomonas vaginalis
TVAG_208170
I
TVAG_209560
Trichomonas vaginalis
TVAG_209560
I
TVAG_213270
Trichomonas vaginalis
TVAG_213270
I
TVAG_215750
Trichomonas vaginalis
TVAG_215750
N
TVAG_217510
Trichomonas vaginalis
TVAG_217510
I
TVAG_218720
Trichomonas vaginalis
TVAG_218720
I
TVAG_223440
Trichomonas vaginalis
TVAG_223440
I
TVAG_223860
Trichomonas vaginalis
TVAG_223860
I
TVAG_236320
Trichomonas vaginalis
TVAG_236320
I
TVAG_242410
Trichomonas vaginalis
TVAG_242410
I
TVAG_243160
Trichomonas vaginalis
TVAG_243160
I
TVAG_255490
Trichomonas vaginalis
TVAG_255490
I
TVAG_258650
Trichomonas vaginalis
TVAG_258650
I
TVAG_261460
Trichomonas vaginalis
TVAG_261460
N
TVAG_262670
Trichomonas vaginalis
TVAG_262670
N
TVAG_264480
Trichomonas vaginalis
TVAG_264480
I
TVAG_274390
Trichomonas vaginalis
TVAG_274390
I
TVAG_281620
Trichomonas vaginalis
TVAG_281620
I
TVAG_284950
Trichomonas vaginalis
TVAG_284950
N
TVAG_286860
Trichomonas vaginalis
TVAG_286860
I
TVAG_287290
Trichomonas vaginalis
TVAG_287290
I
TVAG_287680
Trichomonas vaginalis
TVAG_287680
I
TVAG_290350
Trichomonas vaginalis
TVAG_290350
I
TVAG_297830
Trichomonas vaginalis
TVAG_297830
I
TVAG_298530
Trichomonas vaginalis
TVAG_298530
I
TVAG_298590
Trichomonas vaginalis
TVAG_298590
N
TVAG_300190
Trichomonas vaginalis
TVAG_300190
N
TVAG_304110
Trichomonas vaginalis
TVAG_304110
I
TVAG_312030
Trichomonas vaginalis
TVAG_312030
I
TVAG_314440
Trichomonas vaginalis
TVAG_314440
N
TVAG_315670
Trichomonas vaginalis
TVAG_315670
I
TVAG_315700
Trichomonas vaginalis
TVAG_315700
I
TVAG_317360
Trichomonas vaginalis
TVAG_317360
I
TVAG_318220
Trichomonas vaginalis
TVAG_318220
I
TVAG_320670
Trichomonas vaginalis
TVAG_320670
I
TVAG_321230
Trichomonas vaginalis
TVAG_321230
I
TVAG_333520
Trichomonas vaginalis
TVAG_333520
I
TVAG_336250
Trichomonas vaginalis
TVAG_336250
I
TVAG_347110
Trichomonas vaginalis
TVAG_347110
I
TVAG_356380
Trichomonas vaginalis
TVAG_356380
N
TVAG_356580
Trichomonas vaginalis
TVAG_356580
I
TVAG_358740
Trichomonas vaginalis
TVAG_358740
I
TVAG_362070
Trichomonas vaginalis
TVAG_362070
N
TVAG_384340
Trichomonas vaginalis
TVAG_384340
I
TVAG_384790
Trichomonas vaginalis
TVAG_384790
N
TVAG_384980
Trichomonas vaginalis
TVAG_384980
I
TVAG_389220
Trichomonas vaginalis
TVAG_389220
N
TVAG_398170
Trichomonas vaginalis
TVAG_398170
I
TVAG_406620
Trichomonas vaginalis
TVAG_406620
I
TVAG_407290
Trichomonas vaginalis
TVAG_407290
I
TVAG_407860
Trichomonas vaginalis
TVAG_407860
I
TVAG_417620
Trichomonas vaginalis
TVAG_417620
I
TVAG_418370
Trichomonas vaginalis
TVAG_418370
I
TVAG_422850
Trichomonas vaginalis
TVAG_422850
I
TVAG_428400
Trichomonas vaginalis
TVAG_428400
I
TVAG_429070
Trichomonas vaginalis
TVAG_429070
N
TVAG_431290
Trichomonas vaginalis
TVAG_431290
I
TVAG_443860
Trichomonas vaginalis
TVAG_443860
I
TVAG_446510
Trichomonas vaginalis
TVAG_446510
I
TVAG_448590
Trichomonas vaginalis
TVAG_448590
I
TVAG_450400
Trichomonas vaginalis
TVAG_450400
I
TVAG_451310
Trichomonas vaginalis
TVAG_451310
I
TVAG_464320
Trichomonas vaginalis
TVAG_464320
I
TVAG_466400
Trichomonas vaginalis
TVAG_466400
I
TVAG_469670
Trichomonas vaginalis
TVAG_469670
I
TVAG_471660
Trichomonas vaginalis
TVAG_471660
I
TVAG_474270
Trichomonas vaginalis
TVAG_474270
I
TVAG_481770
Trichomonas vaginalis
TVAG_481770
I
TVAG_484270
Trichomonas vaginalis
TVAG_484270
I
TVAG_485740
Trichomonas vaginalis
TVAG_485740
I
TVAG_488790
Trichomonas vaginalis
TVAG_488790
N
TVAG_490690
Trichomonas vaginalis
TVAG_490690
I
TVAG_494850
Trichomonas vaginalis
TVAG_494850
I
TVAG_500220
Trichomonas vaginalis
TVAG_500220
I
TVAG_501520
Trichomonas vaginalis
TVAG_501520
I
TVAG_511900
Trichomonas vaginalis
TVAG_511900
I
TVAG_514140
Trichomonas vaginalis
TVAG_514140
I
TVAG_515220
Trichomonas vaginalis
TVAG_515220
N
TVAG_518010
Trichomonas vaginalis
TVAG_518010
I
TVAG_518770
Trichomonas vaginalis
TVAG_518770
I
TVAG_520250
Trichomonas vaginalis
TVAG_520250
N
TVAG_525230
Trichomonas vaginalis
TVAG_525230
I
TVAG_528950
Trichomonas vaginalis
TVAG_528950
I
TVAG_535080
Trichomonas vaginalis
TVAG_535080
I
TVAG_535180
Trichomonas vaginalis
TVAG_535180
I
TVAG_544250
Trichomonas vaginalis
TVAG_544250
N
TVAG_544290
Trichomonas vaginalis
TVAG_544290
I
TVAG_547380
Trichomonas vaginalis
TVAG_547380
I
TVAG_550490
Trichomonas vaginalis
TVAG_550490
N
TVAG_551090
Trichomonas vaginalis
TVAG_551090
I
TVAG_551410
Trichomonas vaginalis
TVAG_551410
I
TVAG_552140
Trichomonas vaginalis
TVAG_552140
N
TVAG_552810
Trichomonas vaginalis
TVAG_552810
I
TVAG_555690
Trichomonas vaginalis
TVAG_555690
I
TVAG_555770
Trichomonas vaginalis
TVAG_555770
N
TVAG_556150
Trichomonas vaginalis
TVAG_556150
I
TVAG_557940
Trichomonas vaginalis
TVAG_557940
N
TVAG_563060
Trichomonas vaginalis
TVAG_563060
I
TVAG_563360
Trichomonas vaginalis
TVAG_563360
I
TVAG_566490
Trichomonas vaginalis
TVAG_566490
I
TVAG_568980
Trichomonas vaginalis
TVAG_568980
I
TVAG_578750
Trichomonas vaginalis
TVAG_578750
I
TVAG_579060
Trichomonas vaginalis
TVAG_579060
N
TVAG_579860
Trichomonas vaginalis
TVAG_579860
I
TVAG_581440
Trichomonas vaginalis
TVAG_581440
N
TVAG_590210
Trichomonas vaginalis
TVAG_590210
I
TVAG_595500
Trichomonas vaginalis
TVAG_595500
I
TVAG_595910
Trichomonas vaginalis
TVAG_595910
I
TVAG_597870
Trichomonas vaginalis
TVAG_597870
I
XBP1
Saccharomyces cerevisiae
YIL101C
D