Gorai.006G107500 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.006G107500 T008561_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.692 0.745
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.692 0.745
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.683 0.745
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.683 0.745
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.683 0.745
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.683 0.725
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.677 0.706
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.677 0.706
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.006G107500.1 AP2 134 185

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

167 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL007505 Aedes aegypti AAEL007505 I 0.000
AALB007335 Anopheles albimanus AALB007335 I 0.000
AARA003608 Anopheles arabiensis AARA003608 I 0.000
AATE000074 Anopheles atroparvus AATE000074 I 0.000
ACEP21475 Atta cephalotes ACEP21475 I 0.000
ACHR000365 Anopheles christyi ACHR000365 I 0.000
ACOM024408 Anopheles coluzzii ACOM024408 I 0.000
ACUA001765 Anopheles culicifacies ACUA001765 I 0.000
ACYPI006466 Acyrthosiphon pisum ACYPI006466 I 0.000
ADIR001596 Anopheles dirus ADIR001596 I 0.000
AEPI004232 Anopheles epiroticus AEPI004232 I 0.000
AFUN000312 Anopheles funestus AFUN000312 I 0.000
AGAP005010 Anopheles gambiae AGAP005010 I 0.000
AMAM019276 Anopheles maculatus AMAM019276 I 0.000
AMEC001747 Anopheles melas AMEC001747 I 0.000
AMEM004461 Anopheles merus AMEM004461 I 0.000
AMIN011494 Anopheles minimus AMIN011494 I 0.000
AMSG_09616 Thecamonas trahens AMSG_09616 N 0.000
AQUA009986 Anopheles quadriannulatus AQUA009986 I 0.000
ASTEI09300 Anopheles stephensi ASTEI09300 I 0.000
BGIBMGA000638 Bombyx mori BGIBMGA000638 I 0.000
CapteG168300 Capitella teleta CapteG168300 I 0.000
CapteG88378 Capitella teleta CapteG88378 I 0.000
CBG08197 Caenorhabditis briggsae CBG08197 D 0.000
CBN07279 Caenorhabditis brenneri CBN07279 I 0.000
CBN12980 Caenorhabditis brenneri CBN12980 I 0.000
Cflo_05544--XP_396292.3_APIME Camponotus floridanus Cflo_05544--XP_396292.3_APIME I 0.000
CJA00344 Caenorhabditis japonica CJA00344 I 0.000
CLEC025387 Cimex lectularius CLEC025387 I 0.000
CPIJ000125 Culex quinquefasciatus CPIJ000125 I 0.000
CpipJ_CPIJ000125 Culex pipiens CpipJ_CPIJ000125 I 0.000
CRE09644 Caenorhabditis remanei CRE09644 I 0.000
csin108827 Clonorchis sinensis csin108827 I 0.000
csin110616 Clonorchis sinensis csin110616 I 0.000
D915_03856 Fasciola hepatica D915_03856 I 0.000
DILT_0000999901 Diphyllobothrium latum DILT_0000999901 I 0.000
ECANG7_08582 Echinococcus canadensis ECANG7_08582 I 0.000
ECPE_0001148801 Echinostoma caproni ECPE_0001148801 I 0.000
EmuJ_000784500 Echinococcus multilocularis EmuJ_000784500 I 0.000
irx-c Ciona intestinalis ENSCING00000006449 I 0.000
ENSGMOG00000011698 Gadus morhua ENSGMOG00000011698 I 0.000
Irx6 Mus musculus ENSMUSG00000031738 D 0.000
Irx6 Rattus norvegicus ENSRNOG00000011037 I 0.000
ara Drosophila melanogaster FBgn0015904 D 0.000
GA10403 Drosophila pseudoobscura FBgn0070460 I 0.000
GF24688 Drosophila ananassae FBgn0101681 I 0.000
GG15584 Drosophila erecta FBgn0107830 I 0.000
GH14715 Drosophila grimshawi FBgn0122191 I 0.000
GI12261 Drosophila mojavensis FBgn0135018 I 0.000
GL25202 Drosophila persimilis FBgn0162786 I 0.000
GM25355 Drosophila sechellia FBgn0180213 I 0.000
GD14388 Drosophila simulans FBgn0186071 I 0.000
GJ11492 Drosophila virilis FBgn0198750 I 0.000
GK10560 Drosophila willistoni FBgn0212575 I 0.000
GE21912 Drosophila yakuba FBgn0239150 I 0.000
GB55196 Apis mellifera GB55196 I 0.000
HelroG127856 Helobdella robusta HelroG127856 I 0.000
HelroG153627 Helobdella robusta HelroG153627 I 0.000
HHAL007381-PA Halyomorpha halys HHAL007381-PA I 0.000
HMEL008471 Heliconius melpomene HMEL008471 I 0.000
HmN_000469000 Hymenolepis microstoma HmN_000469000 I 0.000
Hsal_07613--XP_396292.3_APIME Harpegnathos saltator Hsal_07613--XP_396292.3_APIME I 0.000
ISCW015741 Ixodes scapularis ISCW015741 I 0.000
KGM_15162 Danaus plexippus KGM_15162 I 0.000
L798_06794 Zootermopsis nevadensis L798_06794 I 0.000
LCUP015174 Lucilia cuprina LCUP015174 I 0.000
LCUP015460 Lucilia cuprina LCUP015460 I 0.000
LCUP015462 Lucilia cuprina LCUP015462 I 0.000
LDEC015753 Leptinotarsa decemlineata LDEC015753 I 0.000
LotgiG70513 Lottia gigantea LotgiG70513 I 0.000
MCINX001662 Melitaea cinxia MCINX001662 I 0.000
MDOA003906 Musca domestica MDOA003906 I 0.000
MDOA004752 Musca domestica MDOA004752 I 0.000
MDOA012478 Musca domestica MDOA012478 I 0.000
MESCA003747 Megaselia scalaris MESCA003747 I 0.000
NV13312 Nasonia vitripennis NV13312 I 0.000
Ocbimv22017187m.g Octopus bimaculoides Ocbimv22017187m.g I 0.000
PHUM403340 Pediculus humanus PHUM403340 I 0.000
PHUM562240 Pediculus humanus PHUM562240 I 0.000
PPAI010026 Phlebotomus papatasi PPAI010026 I 0.000
PXEA_0003399101 Protopolystoma xenopodis PXEA_0003399101 I 0.000
RPRC002305 Rhodnius prolixus RPRC002305 I 0.000
SINV10244 Solenopsis invicta SINV10244 I 0.000
Sjc_0031820 Schistosoma japonicum Sjc_0031820 I 0.000
Sjc_0031830 Schistosoma japonicum Sjc_0031830 I 0.000
Smp_149230 Schistosoma mansoni Smp_149230 I 0.000
SMU15032098 Schmidtea mediterranea SMU15032098 I 0.000
SNAPOd2T00020438001 Oikopleura dioica SNAPOd2T00020438001 I 0.000
SNAPOd2T00027338001 Oikopleura dioica SNAPOd2T00027338001 I 0.000
SSLN_0000317701 Schistocephalus solidus SSLN_0000317701 I 0.000
T265_09553 Opisthorchis viverrini T265_09553 I 0.000
TASK_0000915701 Taenia asiatica TASK_0000915701 I 0.000
TC003632 Tribolium castaneum TC003632 I 0.000
TsM_000490000 Taenia solium TsM_000490000 I 0.000
TTAC_0000818201 Hydatigera taeniaeformis TTAC_0000818201 I 0.000
irx-1 Caenorhabditis elegans WBGene00007984 I 0.000