Gorai.010G222900 (Gossypium raimondii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Gorai.010G222900 T008678_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.841 0.922
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.841 0.922
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.720 0.784
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.010G222900.1 AP2 55 106

Links

Other AP2 family TFs
Other Gossypium raimondii TFs

295 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MAF4 Arabidopsis lyrata Al_scaffold_0008_3055 I 0.000
AGL27 Arabidopsis thaliana AT1G77080 D 0.000
FLC Arabidopsis thaliana AT5G10140 D 0.000
AGL31 Arabidopsis thaliana AT5G65050 I 0.000
MAF3 Arabidopsis thaliana AT5G65060 I 0.000
MAF4 Arabidopsis thaliana AT5G65070 I 0.000
MAF5 Arabidopsis thaliana AT5G65080 I 0.000
Bo01054s010 Brassica oleracea Bo01054s010 I 0.000
Bo13628s010 Brassica oleracea Bo13628s010 I 0.000
Bo2g166500 Brassica oleracea Bo2g166500 I 0.000
Bo3g005470 Brassica oleracea Bo3g005470 I 0.000
Bo3g024250 Brassica oleracea Bo3g024250 I 0.000
Bo3g100540 Brassica oleracea Bo3g100540 I 0.000
Bo3g100570 Brassica oleracea Bo3g100570 I 0.000
Bo9g173370 Brassica oleracea Bo9g173370 I 0.000
Bo9g173400 Brassica oleracea Bo9g173400 I 0.000
Bostr.0568s0285 Boechera stricta Bostr.0568s0285 I 0.000
Bostr.13175s0088 Boechera stricta Bostr.13175s0088 I 0.000
Bostr.18351s0063 Boechera stricta Bostr.18351s0063 I 0.000
Bra006051 Brassica rapa Bra006051 I 0.000
Bra009055 Brassica rapa Bra009055 I 0.000
Bra022771 Brassica rapa Bra022771 I 0.000
Bra024350 Brassica rapa Bra024350 I 0.000
Bra024351 Brassica rapa Bra024351 I 0.000
Bra028599 Brassica rapa Bra028599 I 0.000
Bra031884 Brassica rapa Bra031884 I 0.000
Bra031886 Brassica rapa Bra031886 I 0.000
Bra031888 Brassica rapa Bra031888 I 0.000
Cagra.0450s0030 Capsella grandiflora Cagra.0450s0030 I 0.000
Cagra.0917s0078 Capsella grandiflora Cagra.0917s0078 I 0.000
Cagra.0917s0080 Capsella grandiflora Cagra.0917s0080 I 0.000
Cagra.0917s0081 Capsella grandiflora Cagra.0917s0081 I 0.000
Cagra.1085s0045 Capsella grandiflora Cagra.1085s0045 I 0.000
Carubv10020979m.g Capsella rubella Carubv10020979m.g I 0.000
Carubv10028173m.g Capsella rubella Carubv10028173m.g I 0.000
cassava15798.m1 Manihot esculenta cassava15798.m1 I 0.000
fgenesh2_kg.233__4__AT5G65050.3 Arabidopsis lyrata fgenesh2_kg.233__4__AT5G65050.3 I 0.000
MAF1 Arabidopsis lyrata fgenesh2_kg.2__2000__AT1G77080.2 I 0.000
fgenesh2_kg.8__2543__AT5G65050.2 Arabidopsis lyrata fgenesh2_kg.8__2543__AT5G65050.2 I 0.000
POPTR_0003s16840 Populus trichocarpa POPTR_0003s16840 I 0.000
POPTR_0003s16870 Populus trichocarpa POPTR_0003s16870 I 0.000
SapurV1A.0658s0010 Salix purpurea SapurV1A.0658s0010 I 0.000
SapurV1A.1446s0020 Salix purpurea SapurV1A.1446s0020 I 0.000
FLC Arabidopsis lyrata scaffold_601028.1 I 0.000
Thhalv10004949m.g Eutrema salsugineum Thhalv10004949m.g I 0.000
Thhalv10005413m.g Eutrema salsugineum Thhalv10005413m.g I 0.000
Thhalv10014726m.g Eutrema salsugineum Thhalv10014726m.g I 0.000
Traes_4BL_9A17EA3B7 Triticum aestivum Traes_4BL_9A17EA3B7 I 0.000