Pavir.Ga02734 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.Ga02734 T009473_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ga02734.1.p AP2 46 87

Links

Other AP2 family TFs
Other Panicum virgatum TFs

19 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI4G38930 Brachypodium distachyon BRADI4G38930 I 0.688
GRMZM2G073258 Zea mays GRMZM2G073258 I 0.685
GRMZM5G837876 Zea mays GRMZM5G837876 I 0.685
MLOC_43207 Hordeum vulgare MLOC_43207 I 0.688
Pavir.Bb00653 Panicum virgatum Pavir.Bb00653 I 0.678
Pavir.Ha00304 Panicum virgatum Pavir.Ha00304 I 0.753
Pavir.Ha00307 Panicum virgatum Pavir.Ha00307 I 0.719
Pavir.Ha01200 Panicum virgatum Pavir.Ha01200 I 0.695
Pavir.Ha01264 Panicum virgatum Pavir.Ha01264 I 0.695
Pavir.Hb01074 Panicum virgatum Pavir.Hb01074 I 0.695
Pavir.Hb01336 Panicum virgatum Pavir.Hb01336 I 0.695
Pavir.J02630 Panicum virgatum Pavir.J02630 I 0.719
Pavir.J30299 Panicum virgatum Pavir.J30299 I 0.687
Sb05g026843 Sorghum bicolor Sb05g026843 I 0.753
Si027485m.g Setaria italica Si027485m.g I 0.695
Si028135m.g Setaria italica Si028135m.g I 0.774
Si028219m.g Setaria italica Si028219m.g I 0.774
Traes_4AS_9450AD3F4 Triticum aestivum Traes_4AS_9450AD3F4 I 0.688
TRIUR3_16508 Triticum urartu TRIUR3_16508 I 0.688