Pavir.J06813 (Panicum virgatum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pavir.J06813 T009563_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J06813.1.p AP2 16 57

Links

Other AP2 family TFs
Other Panicum virgatum TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA004939 Oryza indica BGIOSGA004939 N 0.714
BGIOSGA018034 Oryza indica BGIOSGA018034 N 0.715
BRADI2G25050 Brachypodium distachyon BRADI2G25050 N 0.725
BRADI2G57200 Brachypodium distachyon BRADI2G57200 N 0.706
evm.TU.supercontig_21.63 Carica papaya evm.TU.supercontig_21.63 I 0.684
GRMZM2G307152 Zea mays GRMZM2G307152 N 0.738
GSMUA_Achr10G04450_001 Musa acuminata GSMUA_Achr10G04450_001 N 0.703
LPERR01G34250 Leersia perrieri LPERR01G34250 N 0.714
LPERR05G13420 Leersia perrieri LPERR05G13420 N 0.702
OB01G48490 Oryza brachyantha OB01G48490 N 0.714
OGLUM01G43950 Oryza glumaepatula OGLUM01G43950 N 0.714
OMERI01G36600 Oryza meridionalis OMERI01G36600 N 0.714
OMERI05G14660 Oryza meridionalis OMERI05G14660 N 0.715
ONIVA01G44590 Oryza nivara ONIVA01G44590 N 0.714
ONIVA05G17560 Oryza nivara ONIVA05G17560 N 0.715
OPUNC05G14870 Oryza punctata OPUNC05G14870 N 0.715
ORGLA05G0145800 Oryza glaberrima ORGLA05G0145800 N 0.715
ORUFI01G43070 Oryza rufipogon ORUFI01G43070 N 0.714
OS01G0885900 Oryza sativa OS01G0885900 N 0.714
OS05G0420300 Oryza sativa OS05G0420300 N 0.715
Sb03g042060 Sorghum bicolor Sb03g042060 N 0.747
TRAES3BF106000020CFD_g Triticum aestivum TRAES3BF106000020CFD_g N 0.722