CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

SapurV1A.0124s0180 *(Salix purpurea)* AP2
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF00847 (AP2)	IPR001471	SapurV1A.0124s0180	T009715_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ERF14 M01045_2.00	Arabidopsis thaliana	NVGCCGNCN	NGNCGGCBN	PBM Sullivan et al.(2014) pTH9793	0.750	0.692
ERF106 M01628_2.00	Arabidopsis thaliana	NNNVCRVCN	NGBYGBNNN	PBM Weirauch et al.(2014) pTH7426	0.745	0.654
ERF095 M06624_2.00	Arabidopsis thaliana	YCDCCGCCGCCRYHD	HDRYGGCGGCGGHGR	Dap-seq OMalley et al.(2016) ESE1_col_a	0.740	0.692
ERF095 M06625_2.00	Arabidopsis thaliana	YHNYYDYHDCCGCCGCCDYH	DRHGGCGGCGGHDRHRRNDR	Dap-seq OMalley et al.(2016) ESE1_colamp_a	0.740	0.692
ERF1A M00848_2.00	Arabidopsis thaliana	NNNNRNN	NNYNNNN	PBM Franco-Zorrilla et al.(2014) ATERF1	0.737	0.712
ERF1A M00720_2.00	Arabidopsis thaliana	NMGCCRNCN	NGNYGGCKN	PBM Chang et al.(2013) pTH7202	0.737	0.712
ERF2 M01631_2.00	Arabidopsis thaliana	NNNGCCGNCN	NGNCGGCNNN	PBM Weirauch et al.(2014) pTH8113	0.720	0.692
ERF2 M06672_2.00	Arabidopsis thaliana	HHNHHNYHDYCGCCGCCRYND	HNRYGGCGGCGRHDRNDDNDD	Dap-seq OMalley et al.(2016) ERF2_col_a	0.720	0.692
ERF2 M06673_2.00	Arabidopsis thaliana	NNNNNNNHNNHDSMGCCGCCR	YGGCGGCKSHDNNDNNNNNNN	Dap-seq OMalley et al.(2016) ERF2_colamp_a	0.720	0.692
ERF13 M01615_2.00	Arabidopsis thaliana	VGCCGSCD	HGSCGGCB	PBM Weirauch et al.(2014) pTH7283	0.719	0.673
ERF13 M06612_2.00	Arabidopsis thaliana	NHDBMGCCGCCDYHD	HDRHGGCGGCKVHDN	Dap-seq OMalley et al.(2016) ERF13_colamp_a	0.719	0.673
ERF13 M06613_2.00	Arabidopsis thaliana	HDBMGCCGCCDYHDN	NHDRHGGCGGCKVHD	Dap-seq OMalley et al.(2016) ERF13_col_b	0.719	0.673
ERF1B M01619_2.00	Arabidopsis thaliana	NMGCCGCCRN	NYGGCGGCKN	PBM Weirauch et al.(2014) pTH8795	0.701	0.673
ERF1B M06626_2.00	Arabidopsis thaliana	NHNNHDYMGCCGCCRYHDNHDNNNNNNN	NNNNNNNHDNHDRYGGCGGCKRHDNNDN	Dap-seq OMalley et al.(2016) ERF1_col_a	0.701	0.673
ERF1B M06627_2.00	Arabidopsis thaliana	MGCCGCCD	HGGCGGCK	Dap-seq OMalley et al.(2016) ERF1_colamp_a	0.701	0.673
ERF1B M09703_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF1_Q2_01	0.701	0.673
ERF1B M09704_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF1_Q2	0.701	0.673
ERF105 M01632_2.00	Arabidopsis thaliana	CGCCGGCM	KGCCGGCG	PBM Weirauch et al.(2014) pTH7233	0.699	0.635
ERF105 M06676_2.00	Arabidopsis thaliana	NHNNNNNNNNHNNHDBCGCCGCCR	YGGCGGCGVHDNNDNNNNNNNNDN	Dap-seq OMalley et al.(2016) ERF105_colamp_a	0.699	0.635
ERF105 M06677_2.00	Arabidopsis thaliana	HDSCGCCGCCRYHDH	DHDRYGGCGGCGSHD	Dap-seq OMalley et al.(2016) ERF105_col	0.699	0.635
ERF096 M01630_2.00	Arabidopsis thaliana	NVGCCGNCNN	NNGNCGGCBN	PBM Weirauch et al.(2014) pTH7909	0.697	0.654
PK02330.1 M01095_2.00	Cannabis sativa	NNNGCCGBCN	NGVCGGCNNN	PBM Lambert et al.(2019) pTH10093	0.691	0.654
ERF104 M06682_2.00	Arabidopsis thaliana	NNHHDYMDCCGCCGCCRYH	DRYGGCGGCGGHKRHDDNN	Dap-seq OMalley et al.(2016) ERF104_col_a	0.687	0.615
ERF104 M06683_2.00	Arabidopsis thaliana	BHDSCGCCGCCRYHD	HDRYGGCGGCGSHDV	Dap-seq OMalley et al.(2016) ERF104_colamp_a	0.687	0.615
Q2TN80_WHEAT M09715_2.00	Triticum aestivum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF1_02	0.679	0.577
ERF5_TOBAC M09729_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF4_02	0.679	0.635
ERF2_TOBAC M09727_2.00	Nicotiana tabacum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$ERF2_01	0.679	0.673
For this family, TFs with SR scores > 0.677* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
SapurV1A.0124s0180.1.p	AP2	112	164	LQYKGVRRRPWGKYAAEIRDPKKIGARMWLGTYEKPEDAALAYDRAAFKMLGS

Links
Other AP2 family TFs
Other *Salix purpurea* TFs

879 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ACOC_0000909601	Angiostrongylus costaricensis	ACOC_0000909601	N
ALUE_0000006201	Ascaris lumbricoides	ALUE_0000006201	N
ANCCEY_02227	Ancylostoma ceylanicum	ANCCEY_02227	N
ASIM_0001061401	Anisakis simplex	ASIM_0001061401	N
ASU_13814	Ascaris suum	ASU_13814	N
Bm4196	Brugia malayi	Bm4196	N
BTMF_0001047601	Brugia timori	BTMF_0001047601	N
BTMF_0001685601	Brugia timori	BTMF_0001685601	N
BXY_0116700	Bursaphelenchus xylophilus	BXY_0116700	N
CBG14076	Caenorhabditis briggsae	CBG14076	N
CBN28426	Caenorhabditis brenneri	CBN28426	N
CJA16887	Caenorhabditis japonica	CJA16887	N
CRE00936	Caenorhabditis remanei	CRE00936	N
DICVIV_06612	Dictyocaulus viviparus	DICVIV_06612	N
EVEC_0001355301	Enterobius vermicularis	EVEC_0001355301	N
GPLIN_001118300	Globodera pallida	GPLIN_001118300	N
HCOI00419700	Haemonchus contortus	HCOI00419700	N
HPLM_0000886801	Haemonchus placei	HPLM_0000886801	N
L596_g148	Steinernema carpocapsae	L596_g148	N
L889_g31190	Steinernema feltiae	L889_g31190	N
L892_g12859	Steinernema scapterisci	L892_g12859	N
L893_g14515	Steinernema glaseri	L893_g14515	N
L898_g33187	Steinernema monticolum	L898_g33187	N
LOAG_16508	Loa loa	LOAG_16508	N
nAv.1.0.1.g08576	Acanthocheilonema viteae	nAv.1.0.1.g08576	N
NBR_0000487701	Nippostrongylus brasiliensis	NBR_0000487701	N
nDi.2.2.2.g00913	Dirofilaria immitis	nDi.2.2.2.g00913	N
NECAME_03708	Necator americanus	NECAME_03708	N
nLs.2.1.2.g06387	Litomosoides sigmodontis	nLs.2.1.2.g06387	N
nOo.2.0.1.g07401	Onchocerca ochengi	nOo.2.0.1.g07401	N
OFLC_0000734201	Onchocerca flexuosa	OFLC_0000734201	N
Ppa-npax-4	Pristionchus pacificus	PPA03062	N
PTRK_0001095200	Parastrongyloides trichosuri	PTRK_0001095200	N
RSKR_0000509700	Rhabditophanes kr3021	RSKR_0000509700	N
scaffold1066-EXSNAP2012.3	Pristionchus exspectatus	scaffold1066-EXSNAP2012.3	N
SMUV_0000429701	Syphacia muris	SMUV_0000429701	N
SPAL_0000243500	Strongyloides papillosus	SPAL_0000243500	N
SSTP_0000993700	Strongyloides stercoralis	SSTP_0000993700	N
SVE_0001100	Strongyloides venezuelensis	SVE_0001100	N
TCLT_0000997101	Thelazia callipaeda	TCLT_0000997101	N
TCNE_0000151101	Toxocara canis	TCNE_0000151101	N
TCNE_0000252101	Toxocara canis	TCNE_0000252101	N
npax-2	Caenorhabditis elegans	WBGene00018591	N
WBGene00239907	Onchocerca volvulus	WBGene00239907	N
WUBG_05014	Wuchereria bancrofti	WUBG_05014	N

SapurV1A.0124s0180 (Salix purpurea) AP2

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

879 Related TFs

SapurV1A.0124s0180 **(Salix purpurea)
AP2**