Thhalv10027543m.g (Eutrema salsugineum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Thhalv10027543m.g T010001_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.812 0.882
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.812 0.882
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.812 0.882
ERF5_TOBAC
M09729_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF4_02 		0.808 0.882
ERF6
M01621_2.00 		Arabidopsis thaliana
NNGCCGGCVN
NBGCCGGCNN		 PBM
Weirauch et al.(2014)
pTH7228 		0.800 0.863
ERF6
M06637_2.00 		Arabidopsis thaliana
NHNHHDCCGCCGCCRYHDHHN
NDDHDRYGGCGGCGGHDDNDN		 Dap-seq
OMalley et al.(2016)
ERF6_col 		0.800 0.863
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.793 0.843
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.793 0.843
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.793 0.843
PK02330.1
M01095_2.00 		Cannabis sativa
NNNGCCGBCN
NGVCGGCNNN		 PBM
Lambert et al.(2019)
pTH10093 		0.787 0.843
ERF104
M06682_2.00 		Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN		 Dap-seq
OMalley et al.(2016)
ERF104_col_a 		0.782 0.765
ERF104
M06683_2.00 		Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV		 Dap-seq
OMalley et al.(2016)
ERF104_colamp_a 		0.782 0.765
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.724 0.725
ERF106
M01628_2.00 		Arabidopsis thaliana
NNNVCRVCN
NGBYGBNNN		 PBM
Weirauch et al.(2014)
pTH7426 		0.719 0.745
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.713 0.765
RAP2-2
M00719_2.00 		Arabidopsis thaliana
NNRBYGNN
NNCRVYNN		 PBM
Chang et al.(2013)
pTH7227 		0.705 0.686
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.703 0.765
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.703 0.765
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.703 0.765
ERF14
M01045_2.00 		Arabidopsis thaliana
NVGCCGNCN
NGNCGGCBN		 PBM
Sullivan et al.(2014)
pTH9793 		0.693 0.706
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.688 0.686
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.685 0.725
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.685 0.725
Q7Y1W2_TOBAC
M09735_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CEF1_01 		0.685 0.667
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.684 0.745
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.684 0.745
ERF095
M06624_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRYHD
HDRYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ESE1_col_a 		0.681 0.725
ERF095
M06625_2.00 		Arabidopsis thaliana
YHNYYDYHDCCGCCGCCDYH
DRHGGCGGCGGHDRHRRNDR		 Dap-seq
OMalley et al.(2016)
ESE1_colamp_a 		0.681 0.725
Q5Y836_TOBAC
M09732_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF5_02 		0.677 0.706
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10027543m AP2 146 198

Links

Other AP2 family TFs
Other Eutrema salsugineum TFs

918 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28226.m000839 Ricinus communis 28226.m000839 I 0.000
AMTR_s00024p00224180 Amborella trichopoda AMTR_s00024p00224180 I 0.000
AMTR_s00024p00224470 Amborella trichopoda AMTR_s00024p00224470 I 0.000
AMTR_s00024p00224850 Amborella trichopoda AMTR_s00024p00224850 I 0.000
Aquca_009_00493 Aquilegia coerulea Aquca_009_00493 I 0.000
Aquca_076_00099 Aquilegia coerulea Aquca_076_00099 I 0.000
TT2 Arabidopsis thaliana AT5G35550 I 0.000
Bo8g030520 Brassica oleracea Bo8g030520 I 0.000
Bostr.29044s0068 Boechera stricta Bostr.29044s0068 I 0.000
Bra035532 Brassica rapa Bra035532 I 0.000
Cagra.5428s0005 Capsella grandiflora Cagra.5428s0005 I 0.000
Carubv10006684m.g Capsella rubella Carubv10006684m.g I 0.000
cassava2758.m1 Manihot esculenta cassava2758.m1 I 0.000
cassava28702.m1 Manihot esculenta cassava28702.m1 I 0.000
cassava36364.valid.m1 Manihot esculenta cassava36364.valid.m1 I 0.000
cassava36365.valid.m1 Manihot esculenta cassava36365.valid.m1 I 0.000
cassava7672.valid.m1 Manihot esculenta cassava7672.valid.m1 I 0.000
Ca_03154 Cicer arietinum Ca_03154 I 0.000
Ciclev10009286m.g Citrus clementina Ciclev10009286m.g I 0.000
Eucgr.C00721 Eucalyptus grandis Eucgr.C00721 I 0.000
Eucgr.C00722 Eucalyptus grandis Eucgr.C00722 I 0.000
Eucgr.C00723 Eucalyptus grandis Eucgr.C00723 I 0.000
Eucgr.C00724 Eucalyptus grandis Eucgr.C00724 I 0.000
Eucgr.C00826 Eucalyptus grandis Eucgr.C00826 I 0.000
Eucgr.C02096 Eucalyptus grandis Eucgr.C02096 I 0.000
Eucgr.C03151 Eucalyptus grandis Eucgr.C03151 I 0.000
Eucgr.C03554 Eucalyptus grandis Eucgr.C03554 I 0.000
Eucgr.C03555 Eucalyptus grandis Eucgr.C03555 I 0.000
Eucgr.F03176 Eucalyptus grandis Eucgr.F03176 I 0.000
Eucgr.J02816 Eucalyptus grandis Eucgr.J02816 I 0.000
Eucgr.J02817 Eucalyptus grandis Eucgr.J02817 I 0.000
Eucgr.J02819 Eucalyptus grandis Eucgr.J02819 N 0.000
Eucgr.K01504 Eucalyptus grandis Eucgr.K01504 I 0.000
evm.TU.supercontig_126.33 Carica papaya evm.TU.supercontig_126.33 I 0.000
evm.TU.supercontig_28.71 Carica papaya evm.TU.supercontig_28.71 I 0.000
TT2 Arabidopsis lyrata fgenesh2_kg.7__3049__AT5G35550.1 I 0.000
gene07416-v1.0-hybrid Fragaria vesca gene07416-v1.0-hybrid I 0.000
gene08694-v1.0-hybrid Fragaria vesca gene08694-v1.0-hybrid I 0.000
gene15390-v1.0-hybrid Fragaria vesca gene15390-v1.0-hybrid I 0.000
gene15392-v1.0-hybrid Fragaria vesca gene15392-v1.0-hybrid I 0.000
GLYMA07G04210 Glycine max GLYMA07G04210 I 0.000
GLYMA07G04240 Glycine max GLYMA07G04240 I 0.000
GLYMA10G35050 Glycine max GLYMA10G35050 I 0.000
GLYMA10G35061 Glycine max GLYMA10G35061 I 0.000
GLYMA13G16890 Glycine max GLYMA13G16890 I 0.000
GLYMA16G00920 Glycine max GLYMA16G00920 I 0.000
GLYMA16G00931 Glycine max GLYMA16G00931 I 0.000
GLYMA17G05831 Glycine max GLYMA17G05831 I 0.000
GLYMA20G32500 Glycine max GLYMA20G32500 I 0.000
Gorai.001G015200 Gossypium raimondii Gorai.001G015200 I 0.000
Gorai.001G020400 Gossypium raimondii Gorai.001G020400 I 0.000
Gorai.001G020500 Gossypium raimondii Gorai.001G020500 N 0.000
Gorai.001G020600 Gossypium raimondii Gorai.001G020600 I 0.000
Gorai.003G021100 Gossypium raimondii Gorai.003G021100 I 0.000
Gorai.004G044000 Gossypium raimondii Gorai.004G044000 I 0.000
Gorai.010G087200 Gossypium raimondii Gorai.010G087200 I 0.000
GRMZM2G701063 Zea mays GRMZM2G701063 I 0.000
GSMUA_Achr3G07940_001 Musa acuminata GSMUA_Achr3G07940_001 I 0.000
GSMUA_Achr3G07950_001 Musa acuminata GSMUA_Achr3G07950_001 I 0.000
GSMUA_Achr6G04400_001 Musa acuminata GSMUA_Achr6G04400_001 I 0.000
GSMUA_Achr7G18560_001 Musa acuminata GSMUA_Achr7G18560_001 I 0.000
GSMUA_Achr8G22690_001 Musa acuminata GSMUA_Achr8G22690_001 I 0.000
GSMUA_Achr9G16040_001 Musa acuminata GSMUA_Achr9G16040_001 I 0.000
LjSGA_029658.1 Lotus japonicus LjSGA_029658.1 I 0.000
LjT02E24.110.nc Lotus japonicus LjT02E24.110.nc I 0.000
LjT02E24.130.nc Lotus japonicus LjT02E24.130.nc I 0.000
LjT02E24.60.nc Lotus japonicus LjT02E24.60.nc I 0.000
Lus10000470.g Linum usitatissimum Lus10000470.g I 0.000
Lus10033438.g Linum usitatissimum Lus10033438.g I 0.000
MDP0000031172 Malus domestica MDP0000031172 I 0.000
MDP0000140609 Malus domestica MDP0000140609 I 0.000
MDP0000184538 Malus domestica MDP0000184538 I 0.000
MDP0000210851 Malus domestica MDP0000210851 I 0.000
MDP0000318013 Malus domestica MDP0000318013 I 0.000
MDP0000437717 Malus domestica MDP0000437717 I 0.000
MDP0000887107 Malus domestica MDP0000887107 I 0.000
mgf006108m Mimulus guttatus mgf006108m I 0.000
MTR_3g097450 Medicago truncatula MTR_3g097450 I 0.000
MTR_4g125520 Medicago truncatula MTR_4g125520 I 0.000
MTR_8g020490 Medicago truncatula MTR_8g020490 I 0.000
OB03G30160 Oryza brachyantha OB03G30160 I 0.000
OB06G16110 Oryza brachyantha OB06G16110 I 0.000
orange1.1g025602m.g Citrus sinensis orange1.1g025602m.g I 0.000
orange1.1g036215m.g Citrus sinensis orange1.1g036215m.g I 0.000
ORGLA03G0196700 Oryza glaberrima ORGLA03G0196700 I 0.000
ORGLA06G0059500 Oryza glaberrima ORGLA06G0059500 I 0.000
ORUFI06G06900 Oryza rufipogon ORUFI06G06900 I 0.000
Pavir.Db02046 Panicum virgatum Pavir.Db02046 I 0.000
PDK_20s1554342g001 Phoenix dactylifera PDK_20s1554342g001 I 0.000
PDK_20s1716541g001 Phoenix dactylifera PDK_20s1716541g001 I 0.000
PDK_20s1918041g001 Phoenix dactylifera PDK_20s1918041g001 I 0.000
PK16315.1 Cannabis sativa PK16315.1 I 0.000
Pm005570 Prunus mume Pm005570 I 0.000
Pm005571 Prunus mume Pm005571 I 0.000
Pm005572 Prunus mume Pm005572 I 0.000
Pm013279 Prunus mume Pm013279 I 0.000
Pm027045 Prunus mume Pm027045 I 0.000
Pm027047 Prunus mume Pm027047 I 0.000
Pm027048 Prunus mume Pm027048 I 0.000
Pm029489 Prunus mume Pm029489 I 0.000
POPTR_0006s23810 Populus trichocarpa POPTR_0006s23810 I 0.000
POPTR_0006s23840 Populus trichocarpa POPTR_0006s23840 I 0.000
POPTR_0006s29080 Populus trichocarpa POPTR_0006s29080 I 0.000
POPTR_0013s05310 Populus trichocarpa POPTR_0013s05310 I 0.000
POPTR_0018s03770 Populus trichocarpa POPTR_0018s03770 I 0.000
POPTR_0018s05530 Populus trichocarpa POPTR_0018s05530 I 0.000
PRUPE_ppa010252mg Prunus persica PRUPE_ppa010252mg I 0.000
PRUPE_ppa017136mg Prunus persica PRUPE_ppa017136mg I 0.000
PRUPE_ppa019380mg Prunus persica PRUPE_ppa019380mg I 0.000
PRUPE_ppa022205mg Prunus persica PRUPE_ppa022205mg I 0.000
PRUPE_ppa023768mg Prunus persica PRUPE_ppa023768mg I 0.000
PRUPE_ppa023789mg Prunus persica PRUPE_ppa023789mg I 0.000
PRUPE_ppa023812mg Prunus persica PRUPE_ppa023812mg I 0.000
PRUPE_ppa024074mg Prunus persica PRUPE_ppa024074mg I 0.000
Q2TCH0_PETHY Petunia x hybrida Q2TCH0_PETHY D 0.000
SapurV1A.0263s0400 Salix purpurea SapurV1A.0263s0400 I 0.000
SapurV1A.0710s0050 Salix purpurea SapurV1A.0710s0050 I 0.000
SapurV1A.0710s0070 Salix purpurea SapurV1A.0710s0070 I 0.000
SapurV1A.1276s0060 Salix purpurea SapurV1A.1276s0060 I 0.000
Sb01g032770 Sorghum bicolor Sb01g032770 I 0.000
Sb10g006700 Sorghum bicolor Sb10g006700 I 0.000
Si038905m.g Setaria italica Si038905m.g I 0.000
Solyc12g049300.1 Solanum lycopersicum Solyc12g049300.1 I 0.000
TCM_000535 Theobroma cacao TCM_000535 I 0.000
TCM_004509 Theobroma cacao TCM_004509 I 0.000
TCM_010778 Theobroma cacao TCM_010778 I 0.000
TCM_029121 Theobroma cacao TCM_029121 I 0.000
TCM_037376 Theobroma cacao TCM_037376 I 0.000
TCM_037377 Theobroma cacao TCM_037377 I 0.000
TCM_037379 Theobroma cacao TCM_037379 I 0.000
TCM_037555 Theobroma cacao TCM_037555 I 0.000
TCM_037559 Theobroma cacao TCM_037559 I 0.000
Thhalv10003461m.g Eutrema salsugineum Thhalv10003461m.g I 0.000
VIT_04s0008g01800 Vitis vinifera VIT_04s0008g01800 I 0.000
VIT_04s0008g01810 Vitis vinifera VIT_04s0008g01810 I 0.000
VIT_04s0008g01820 Vitis vinifera VIT_04s0008g01820 I 0.000
VIT_04s0008g01830 Vitis vinifera VIT_04s0008g01830 N 0.000
VIT_04s0008g01840 Vitis vinifera VIT_04s0008g01840 I 0.000
VIT_09s0002g01400 Vitis vinifera VIT_09s0002g01400 I 0.000
VIT_09s0002g01410 Vitis vinifera VIT_09s0002g01410 I 0.000
VIT_11s0016g01300 Vitis vinifera VIT_11s0016g01300 I 0.000
VIT_11s0016g01310 Vitis vinifera VIT_11s0016g01310 I 0.000
VIT_11s0016g01320 Vitis vinifera VIT_11s0016g01320 I 0.000
VIT_13s0084g00530 Vitis vinifera VIT_13s0084g00530 I 0.000