FIBRA_07885 (Fibroporia radiculosa)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04383 (KilA-N) IPR018004 FIBRA_07885 T011910_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
estExt_fgenesh2_pg.C_10694_CONSTRUCT
M01102_2.00 		PBM CONSTRUCTS
NNACGCGW
WCGCGTNN		 PBM
Lambert et al.(2019)
pTH9838 		0.848 0.840
ANIA_03154
M01650_2.00 		Aspergillus nidulans
NNACGCG
CGCGTNN		 PBM
Weirauch et al.(2014)
pTH8232 		0.799 0.560
NCU07246
M01653_2.00 		Neurospora crassa
NDCRCGN
NCGYGHN		 PBM
Weirauch et al.(2014)
pTH8957 		0.778 0.587
MBP1
M00003_2.00 		Saccharomyces cerevisiae
VACGCGWD
HWCGCGTB		 PBM
Badis et al.(2008)
MBP1_4486 		0.736 0.507
MBP1
M01514_2.00 		Saccharomyces cerevisiae
NNNNDCRCGH
DCGYGHNNNN		 PBM
Zhu et al.(2009)
Mbp1 		0.736 0.507
MBP1
M07434_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0329.1 		0.736 0.507
MBP1
M08472_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 Misc
DeBoer et al.(2011)
YDL056W_500 		0.736 0.507
NCU07587
M01654_2.00 		Neurospora crassa
NNNDCRCGN
NCGYGHNNN		 PBM
Weirauch et al.(2014)
pTH9687 		0.724 0.600
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CCM05655 APSES 20 95

Links

Other APSES family TFs
Other Fibroporia radiculosa TFs

439 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG003708.1 Alligator sinensis Alligator_sinensis_CCG003708.1 N
Cmyd_10013223 Chelonia mydas Cmyd_10013223 N
ENSAMEG00000017065 Ailuropoda melanoleuca ENSAMEG00000017065 N
ENSAMXG00000008132 Astyanax mexicanus ENSAMXG00000008132 N
NPAS4 Bos taurus ENSBTAG00000014925 N
ENSBTAP00000019870-D1 Bos grunniens ENSBTAP00000019870-D1 N
NPAS4 Canis familiaris ENSCAFG00000012711 N
NPAS4 Callithrix jacchus ENSCJAG00000001482 N
NPAS4 Cavia porcellus ENSCPOG00000000685 N
ENSCSAG00000008212 Chlorocebus sabaeus ENSCSAG00000008212 N
npas4a Danio rerio ENSDARG00000055752 N
npas4b Danio rerio ENSDARG00000087753 N
NPAS4 Dasypus novemcinctus ENSDNOG00000042408 N
NPAS4 Equus caballus ENSECAG00000013683 N
NPAS4 Erinaceus europaeus ENSEEUG00000004685 N
NPAS4 Echinops telfairi ENSETEG00000003654 N
NPAS4 Felis catus ENSFCAG00000009299 N
NPAS4 Homo sapiens ENSG00000174576 N
npas4a Gasterosteus aculeatus ENSGACG00000017076 N
NPAS4 Gorilla gorilla ENSGGOG00000008608 N
ENSGMOG00000003455 Gadus morhua ENSGMOG00000003455 N
NPAS4 Loxodonta africana ENSLAFG00000011138 N
ENSLOCG00000000650 Lepisosteus oculatus ENSLOCG00000000650 N
ENSMEUG00000004384 Macropus eugenii ENSMEUG00000004384 N
NPAS4 Microcebus murinus ENSMICG00000003754 N
NPAS4 Myotis lucifugus ENSMLUG00000004042 N
NPAS4 Macaca mulatta ENSMMUG00000015982 N
NPAS4 Monodelphis domestica ENSMODG00000008299 N
ENSMPUG00000003040 Mustela putorius furo ENSMPUG00000003040 N
Npas4 Mus musculus ENSMUSG00000045903 N
ENSNLEG00000006104 Nomascus leucogenys ENSNLEG00000006104 N
ENSOARG00000005005 Ovis aries ENSOARG00000005005 N
NPAS4 Otolemur garnettii ENSOGAG00000010446 N
ENSONIG00000005476 Oreochromis niloticus ENSONIG00000005476 N
NPAS4 Ochotona princeps ENSOPRG00000008977 N
npas4a Oryzias latipes ENSORLG00000001999 N
ENSP00000311196 Macaca fascicularis ENSP00000311196 N
ENSPANG00000007006 Papio anubis ENSPANG00000007006 N
ENSPFOG00000009551 Poecilia formosa ENSPFOG00000009551 N
ENSPPYG00000003026 Pongo abelii ENSPPYG00000003026 N
NPAS4 Pan troglodytes ENSPTRG00000003923 N
NPAS4 Pteropus vampyrus ENSPVAG00000001233 N
Npas4 Rattus norvegicus ENSRNOG00000020009 N
NPAS4 Sorex araneus ENSSARG00000003603 N
ENSSHAG00000009488 Sarcophilus harrisii ENSSHAG00000009488 N
NPAS4 Sus scrofa ENSSSCG00000012942 N
ENSSTOG00000023146 Ictidomys tridecemlineatus ENSSTOG00000023146 N
npas4a Tetraodon nigroviridis ENSTNIG00000016823 N
npas4a Takifugu rubripes ENSTRUG00000011857 N
ENSTSYG00000001991 Tarsius syrichta ENSTSYG00000001991 N
NPAS4 Tursiops truncatus ENSTTRG00000001951 N
ENSXMAG00000013170 Xiphophorus maculatus ENSXMAG00000013170 N
Myotis_brandtii_NPAS4_10030769 Myotis brandtii Myotis_brandtii_NPAS4_10030769 N
Ogr08183 Ophisaurus gracilis Ogr08183 N
Pvit_07066 Pogona vitticeps Pvit_07066 N
npas4 Xenopus tropicalis XB-GENE-993002 N