PILCRDRAFT_812190 (Piloderma croceum)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04383 (KilA-N) IPR018004 PILCRDRAFT_812190 T012219_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU07587
M01654_2.00 		Neurospora crassa
NNNDCRCGN
NCGYGHNNN		 PBM
Weirauch et al.(2014)
pTH9687 		0.710 0.646
estExt_fgenesh2_pg.C_10694_CONSTRUCT
M01102_2.00 		PBM CONSTRUCTS
NNACGCGW
WCGCGTNN		 PBM
Lambert et al.(2019)
pTH9838 		0.684 0.608
MBP1
M00003_2.00 		Saccharomyces cerevisiae
VACGCGWD
HWCGCGTB		 PBM
Badis et al.(2008)
MBP1_4486 		0.673 0.430
MBP1
M01514_2.00 		Saccharomyces cerevisiae
NNNNDCRCGH
DCGYGHNNNN		 PBM
Zhu et al.(2009)
Mbp1 		0.673 0.430
MBP1
M07434_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0329.1 		0.673 0.430
MBP1
M08472_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 Misc
DeBoer et al.(2011)
YDL056W_500 		0.673 0.430
NCU07246
M01653_2.00 		Neurospora crassa
NDCRCGN
NCGYGHN		 PBM
Weirauch et al.(2014)
pTH8957 		0.655 0.443
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
KIM90442 APSES 30 111

Links

Other APSES family TFs
Other Piloderma croceum TFs

360 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC198518.3_FG005 Zea mays AC198518.3_FG005 N
BGIOSGA035596 Oryza indica BGIOSGA035596 N
BGIOSGA037460 Oryza indica BGIOSGA037460 N
BRADI4G06567 Brachypodium distachyon BRADI4G06567 N
BRADI4G12615 Brachypodium distachyon BRADI4G12615 N
Ca_05643 Cicer arietinum Ca_05643 N
chr5.CM0200.490.nc Lotus japonicus chr5.CM0200.490.nc N
chr5.CM0200.500.nc Lotus japonicus chr5.CM0200.500.nc N
gene12191-v1.0-hybrid Fragaria vesca gene12191-v1.0-hybrid N
GRMZM2G165188 Zea mays GRMZM2G165188 N
MTR_1g106470 Medicago truncatula MTR_1g106470 N
OB11G25500 Oryza brachyantha OB11G25500 N
OBART11G20580 Oryza barthii OBART11G20580 N
OGLUM11G20000 Oryza glumaepatula OGLUM11G20000 N
OGLUM12G15010 Oryza glumaepatula OGLUM12G15010 N
OLONG_021754 Oryza longistaminata OLONG_021754 N
OLONG_028675 Oryza longistaminata OLONG_028675 N
ONIVA11G20620 Oryza nivara ONIVA11G20620 N
OPUNC11G17200 Oryza punctata OPUNC11G17200 N
OPUNC12G12060 Oryza punctata OPUNC12G12060 N
ORGLA11G0169400 Oryza glaberrima ORGLA11G0169400 N
ORGLA12G0196200 Oryza glaberrima ORGLA12G0196200 N
ORUFI11G22390 Oryza rufipogon ORUFI11G22390 N
ORUFI12G14590 Oryza rufipogon ORUFI12G14590 N
OS11G0634700 Oryza sativa OS11G0634700 N
Pavir.Ca02388 Panicum virgatum Pavir.Ca02388 N
Pavir.Ca02532 Panicum virgatum Pavir.Ca02532 N
Pavir.Cb00430 Panicum virgatum Pavir.Cb00430 N
Pavir.Ha00126 Panicum virgatum Pavir.Ha00126 N
Pavir.Hb00249 Panicum virgatum Pavir.Hb00249 N
Pavir.Ia01481 Panicum virgatum Pavir.Ia01481 N
Pavir.Ib03951 Panicum virgatum Pavir.Ib03951 N
Sb01g014580 Sorghum bicolor Sb01g014580 N
Sb08g019780 Sorghum bicolor Sb08g019780 N
Si022813m.g Setaria italica Si022813m.g N
Si024550m.g Setaria italica Si024550m.g N
Si028242m.g Setaria italica Si028242m.g N
Si038695m.g Setaria italica Si038695m.g N
Solyc10g049720.1 Solanum lycopersicum Solyc10g049720.1 N
TRAES3BF169000100CFD_g Triticum aestivum TRAES3BF169000100CFD_g N
Traes_3DL_801E89185 Triticum aestivum Traes_3DL_801E89185 N
TRIUR3_10349 Triticum urartu TRIUR3_10349 N