GLOTRDRAFT_136133 (Gloeophyllum trabeum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 GLOTRDRAFT_136133 T014987_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NCU01238
M01669_2.00 		Neurospora crassa
NYATNNNN
NNNNATRN		 PBM
Weirauch et al.(2014)
pTH8942 		0.443 0.482
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EPQ59198 ARID/BRIGHT 234 319

Links

Other ARID/BRIGHT family TFs
Other Gloeophyllum trabeum TFs

179 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30180.m001071 Ricinus communis 30180.m001071 N 0.000
Aquca_004_00748 Aquilegia coerulea Aquca_004_00748 I 0.000
BRADI1G04280 Brachypodium distachyon BRADI1G04280 N 0.000
cassava7163.valid.m1 Manihot esculenta cassava7163.valid.m1 N 0.000
Ca_07159 Cicer arietinum Ca_07159 N 0.000
chr1.CM0816.330.nc Lotus japonicus chr1.CM0816.330.nc N 0.000
Cla017413 Citrullus lanatus Cla017413 N 0.000
Cucsa.340200 Cucumis sativus Cucsa.340200 N 0.000
evm.TU.supercontig_92.83 Carica papaya evm.TU.supercontig_92.83 N 0.000
gene14814-v1.0-hybrid Fragaria vesca gene14814-v1.0-hybrid N 0.000
GLYMA02G23590 Glycine max GLYMA02G23590 N 0.000
GLYMA03G28150 Glycine max GLYMA03G28150 N 0.000
GLYMA19G30910 Glycine max GLYMA19G30910 N 0.000
Gorai.007G352300 Gossypium raimondii Gorai.007G352300 N 0.000
GRMZM2G027068 Zea mays GRMZM2G027068 N 0.000
GSMUA_Achr8G23980_001 Musa acuminata GSMUA_Achr8G23980_001 N 0.000
LPERR03G32730 Leersia perrieri LPERR03G32730 N 0.000
Lus10018020.g Linum usitatissimum Lus10018020.g N 0.000
MDP0000138102 Malus domestica MDP0000138102 N 0.000
MDP0000213892 Malus domestica MDP0000213892 N 0.000
OGLUM03G38250 Oryza glumaepatula OGLUM03G38250 N 0.000
OMERI03G35360 Oryza meridionalis OMERI03G35360 N 0.000
OPUNC03G35590 Oryza punctata OPUNC03G35590 N 0.000
ORGLA03G0352000 Oryza glaberrima ORGLA03G0352000 N 0.000
ORUFI03G40090 Oryza rufipogon ORUFI03G40090 N 0.000
OS03G0811400 Oryza sativa OS03G0811400 N 0.000
Pavir.J02699 Panicum virgatum Pavir.J02699 N 0.000
Pavir.J24868 Panicum virgatum Pavir.J24868 N 0.000
PGSC0003DMG400008378 Solanum tuberosum PGSC0003DMG400008378 N 0.000
PK23387.1 Cannabis sativa PK23387.1 N 0.000
Pm025589 Prunus mume Pm025589 N 0.000
POPTR_0006s03550 Populus trichocarpa POPTR_0006s03550 N 0.000
POPTR_0016s03460 Populus trichocarpa POPTR_0016s03460 N 0.000
PRUPE_ppa011532mg Prunus persica PRUPE_ppa011532mg N 0.000
SapurV1A.0159s0020 Salix purpurea SapurV1A.0159s0020 N 0.000
Sb01g003830 Sorghum bicolor Sb01g003830 N 0.000
Solyc10g078380.1 Solanum lycopersicum Solyc10g078380.1 N 0.000
TCM_024016 Theobroma cacao TCM_024016 N 0.000
VIT_08s0040g01240 Vitis vinifera VIT_08s0040g01240 I 0.000