ORUFI06G22870 (Oryza rufipogon)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ORUFI06G22870 T015370_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.674 0.788
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.579 0.706
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ORUFI06G22870.1 ARID/BRIGHT 166 263
ORUFI06G22870.2 ARID/BRIGHT 166 263

Links

Other ARID/BRIGHT family TFs
Other Oryza rufipogon TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29646.m001078 Ricinus communis 29646.m001078 N 0.000
AMTR_s00010p00144270 Amborella trichopoda AMTR_s00010p00144270 I 0.000
Aquca_081_00012 Aquilegia coerulea Aquca_081_00012 I 0.000
BHLH32 Arabidopsis thaliana AT3G25710 I 0.000
Bo2g138630 Brassica oleracea Bo2g138630 I 0.000
Bo7g081980 Brassica oleracea Bo7g081980 I 0.000
Bostr.0556s0241 Boechera stricta Bostr.0556s0241 I 0.000
Bra025158 Brassica rapa Bra025158 I 0.000
Bra026510 Brassica rapa Bra026510 I 0.000
Cagra.0417s0002 Capsella grandiflora Cagra.0417s0002 I 0.000
Carubv10017470m.g Capsella rubella Carubv10017470m.g I 0.000
Ca_02482 Cicer arietinum Ca_02482 N 0.000
Ca_19863 Cicer arietinum Ca_19863 N 0.000
Cla013743 Citrullus lanatus Cla013743 I 0.000
Cucsa.200860 Cucumis sativus Cucsa.200860 I 0.000
BHLH32 Arabidopsis lyrata fgenesh2_kg.5__324__AT3G25710.1 I 0.000
GLYMA06G43560 Glycine max GLYMA06G43560 N 0.000
GLYMA12G14400 Glycine max GLYMA12G14400 N 0.000
GLYMA12G33751 Glycine max GLYMA12G33751 I 0.000
GLYMA13G36741 Glycine max GLYMA13G36741 I 0.000
GSMUA_Achr11G13440_001 Musa acuminata GSMUA_Achr11G13440_001 I 0.000
LjT46P06.140.nd Lotus japonicus LjT46P06.140.nd N 0.000
Lus10001885.g Linum usitatissimum Lus10001885.g I 0.000
Lus10013917.g Linum usitatissimum Lus10013917.g I 0.000
Lus10034271.g Linum usitatissimum Lus10034271.g I 0.000
Lus10038306.g Linum usitatissimum Lus10038306.g N 0.000
Lus10041493.g Linum usitatissimum Lus10041493.g I 0.000
MTR_2g091190 Medicago truncatula MTR_2g091190 N 0.000
MTR_4g079760 Medicago truncatula MTR_4g079760 N 0.000
PK25264.1 Cannabis sativa PK25264.1 N 0.000
POPTR_0013s12190 Populus trichocarpa POPTR_0013s12190 N 0.000
POPTR_0019s11870 Populus trichocarpa POPTR_0019s11870 N 0.000
SapurV1A.0958s0180 Salix purpurea SapurV1A.0958s0180 N 0.000
SapurV1A.2444s0040 Salix purpurea SapurV1A.2444s0040 N 0.000
TCM_001690 Theobroma cacao TCM_001690 N 0.000
Thhalv10004524m.g Eutrema salsugineum Thhalv10004524m.g I 0.000
VIT_12s0028g02350 Vitis vinifera VIT_12s0028g02350 N 0.000