Afo_R007033 (Aptenodytes forsteri)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 Afo_R007033 T015848_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.785 1.000
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.695 0.895
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.695 0.895
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.695 0.895
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.695 0.895
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.695 0.895
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.695 0.895
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.675 0.488
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.657 0.756
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.644 0.791
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.644 0.791
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.644 0.791
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.644 0.791
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.621 0.686
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.508 0.419
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.508 0.372
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Afo_R007033 ARID/BRIGHT 18 104

Links

Other ARID/BRIGHT family TFs
Other Aptenodytes forsteri TFs

364 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACHR008952 Anopheles christyi ACHR008952 I 0.000
AEPI008594 Anopheles epiroticus AEPI008594 I 0.000
AMEM005509 Anopheles merus AMEM005509 I 0.000
AQUA008219 Anopheles quadriannulatus AQUA008219 I 0.000
CPIJ013490 Culex quinquefasciatus CPIJ013490 I 0.000
CpipJ_CPIJ013490 Culex pipiens CpipJ_CPIJ013490 I 0.000
D915_00206 Fasciola hepatica D915_00206 I 0.000
D918_02241 Trichuris suis D918_02241 I 0.000
TEAD1 Anolis carolinensis ENSACAG00000004642 I 0.000
ENSAMEG00000002258 Ailuropoda melanoleuca ENSAMEG00000002258 I 0.000
ENSAMXG00000010081 Astyanax mexicanus ENSAMXG00000010081 I 0.000
TEAD1 Bos taurus ENSBTAG00000032657 N 0.000
TEAD1 Cavia porcellus ENSCPOG00000001830 N 0.000
tead1b Danio rerio ENSDARG00000059483 I 0.000
TEAD1 Dasypus novemcinctus ENSDNOG00000015235 I 0.000
TEAD4 Dasypus novemcinctus ENSDNOG00000030589 I 0.000
Tead3 Dipodomys ordii ENSDORG00000010798 I 0.000
TEAD1 Felis catus ENSFCAG00000019353 I 0.000
TEAD1 Homo sapiens ENSG00000187079 D 0.000
TEAD1 Gorilla gorilla ENSGGOG00000003412 N 0.000
ENSLACG00000016717 Latimeria chalumnae ENSLACG00000016717 N 0.000
TEAD3 Microcebus murinus ENSMICG00000000029 I 0.000
TEAD1 Microcebus murinus ENSMICG00000007178 I 0.000
TEAD1 Myotis lucifugus ENSMLUG00000009137 I 0.000
TEAD4 Macaca mulatta ENSMMUG00000011299 I 0.000
TEAD3 Macaca mulatta ENSMMUG00000015909 I 0.000
ENSNLEG00000008666 Nomascus leucogenys ENSNLEG00000008666 I 0.000
ENSOANG00000021775 Ornithorhynchus anatinus ENSOANG00000021775 N 0.000
TEAD1 Oryctolagus cuniculus ENSOCUG00000007955 I 0.000
ENSPANG00000007045 Papio anubis ENSPANG00000007045 I 0.000
ENSPANG00000018522 Papio anubis ENSPANG00000018522 I 0.000
ENSPSIG00000017834 Pelodiscus sinensis ENSPSIG00000017834 I 0.000
TEAD3 Pan troglodytes ENSPTRG00000018086 I 0.000
TEAD1 Sorex araneus ENSSARG00000001748 N 0.000
ENSSHAG00000015930 Sarcophilus harrisii ENSSHAG00000015930 I 0.000
ENSSTOG00000013115 Ictidomys tridecemlineatus ENSSTOG00000013115 I 0.000
tead1b Takifugu rubripes ENSTRUG00000017473 N 0.000
ENSXMAG00000003088 Xiphophorus maculatus ENSXMAG00000003088 N 0.000
e_gw.291.69.1 Branchiostoma floridae e_gw.291.69.1 I 0.000
LCUP007338 Lucilia cuprina LCUP007338 I 0.000
PPAI001408 Phlebotomus papatasi PPAI001408 I 0.000
SMRZ_0002317401 Schistosoma margrebowiei SMRZ_0002317401 I 0.000
SMTD_0001953201 Schistosoma mattheei SMTD_0001953201 I 0.000
SROB_0002407501 Schistosoma rodhaini SROB_0002407501 I 0.000