CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_4000063
(
Micromonas pusilla
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
fgenesh1_pg.C_scaffold_4000063
T016005_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_4000063
ARID/BRIGHT
15
199
SEDEFLEDLIAFLQANGGEKLAPPGCGTSPARILLDDEISLECFLPAPARDRARRARVVRARGHVATAAPTTYKFLSNENEARPLTIDPILLSRRPIADANTFPTRTLNGAKLDLFGLYRAVVSRGGFPSSKGGVNGGGGGDKREKLNWTRDVFPCLSNYTENHRATSVGHDLITHYQNYLCEYE
Links
Other
ARID/BRIGHT
family TFs
Other
Micromonas pusilla
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
EuGene.0400010690
Micromonas sp RCC299
EuGene.0400010690
N
0.644
EuGene.1400010189
Ostreococcus RCC809
EuGene.1400010189
N
0.520
OSTLU_27423
Ostreococcus lucimarinus
OSTLU_27423
N
0.558
OSTLU_27497
Ostreococcus lucimarinus
OSTLU_27497
N
0.558