Bo5g076230 (Brassica oleracea)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bo5g076230 T018685_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REM19
M06702_2.00 		Arabidopsis thaliana
TKWTTTTTTTTTKKY
RMMAAAAAAAAAWMA		 Dap-seq
OMalley et al.(2016)
REM19_col_a 		0.968 0.968
REM19
M06703_2.00 		Arabidopsis thaliana
NWBTTTTTTTTTTTTKKHHWH
DWDDMMAAAAAAAAAAAAVWN		 Dap-seq
OMalley et al.(2016)
REM19_colamp_a 		0.968 0.968
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo5g076230.1 B3 124 218

Links

Other B3 family TFs
Other Brassica oleracea TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB09078.1 Alternaria brassicicola AB09078.1 I
AUEXF2481DRAFT_108778 Aureobasidium subglaciale AUEXF2481DRAFT_108778 I
BAUCODRAFT_68708 Baudoinia compniacensis BAUCODRAFT_68708 N
COCC4DRAFT_163074 Bipolaris maydis COCC4DRAFT_163074 I
COCCADRAFT_104228 Bipolaris zeicola COCCADRAFT_104228 I
COCMIDRAFT_85681 Bipolaris oryzae COCMIDRAFT_85681 I
COCSADRAFT_136667 Bipolaris sorokiniana COCSADRAFT_136667 I
COCVIDRAFT_108803 Bipolaris victoriae COCVIDRAFT_108803 I
DOTSEDRAFT_72344 Dothistroma septosporum DOTSEDRAFT_72344 I
estExt_fgenesh1_pg.C_70029 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_70029 I
gw1.5.564.1 Mycosphaerella fijiensis gw1.5.564.1 N
H102_02673 Trichophyton rubrum H102_02673 I
H105_02690 Trichophyton soudanense H105_02690 I
LEMA_P018870.1 Leptosphaeria maculans LEMA_P018870.1 I
M437DRAFT_9881 Aureobasidium melanogenum M437DRAFT_9881 I
M438DRAFT_281957 Aureobasidium pullulans M438DRAFT_281957 I
MCYG_05256 Arthroderma otae MCYG_05256 I
MGYG_06299 Microsporum gypseum MGYG_06299 I
MPH_06655 Macrophomina phaseolina MPH_06655 I
MYCFIDRAFT_215419 Pseudocercospora fijiensis MYCFIDRAFT_215419 N
Mycgr3G46610 Zymoseptoria tritici Mycgr3G46610 N
OIDMADRAFT_170457 Oidiodendron maius OIDMADRAFT_170457 N
PTRG_01131 Pyrenophora triticirepentis PTRG_01131 I
PTT_19009 Pyrenophora teres PTT_19009 I
PV09_00215 Verruconis gallopava PV09_00215 I
SEPMUDRAFT_149720 Sphaerulina musiva SEPMUDRAFT_149720 N
SETTUDRAFT_105303 Setosphaeria turcica SETTUDRAFT_105303 I
SNOG_09345 Stagonospora nodorum SNOG_09345 I
TEQG_04727 Trichophyton equinum TEQG_04727 I
TESG_03936 Trichophyton tonsurans TESG_03936 I
W97_05116 Coniosporium apollinis W97_05116 I