CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OBART01G41410
(
Oryza barthii
)
B3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02362 (B3)
IPR003340
OBART01G41410
T019964_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OBART01G41410.1
B3
255
357
LQKVLKQSDVGSLGRIVLPKKEAEVHLPELKTRDGVSIPMEDIGTSQVWNMRYRFWPNNKSRMYLLENTGDFVRSNELQEGDFIVIYSDIKSGKYLIRGVKVR
Links
Other
B3
family TFs
Other
Oryza barthii
TFs
61 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aan_R003465
Calypte anna
Aan_R003465
I
Aan_R015831
Calypte anna
Aan_R015831
I
ACAC_0000711701
Angiostrongylus cantonensis
ACAC_0000711701
I
ACAC_0000956101
Angiostrongylus cantonensis
ACAC_0000956101
I
ACEP17779
Atta cephalotes
ACEP17779
I
ACOC_0000749401
Angiostrongylus costaricensis
ACOC_0000749401
I
Afo_R002509
Aptenodytes forsteri
Afo_R002509
I
Afo_R011426
Aptenodytes forsteri
Afo_R011426
I
Alligator_sinensis_CCG008420.1
Alligator sinensis
Alligator_sinensis_CCG008420.1
I
Alligator_sinensis_CCG018847.1
Alligator sinensis
Alligator_sinensis_CCG018847.1
I
ANCCAN_20599
Ancylostoma caninum
ANCCAN_20599
I
ANCCAN_22066
Ancylostoma caninum
ANCCAN_22066
I
ANCCEY_12461
Ancylostoma ceylanicum
ANCCEY_12461
I
ANCDUO_15746
Ancylostoma duodenale
ANCDUO_15746
I
ASIM_0001548701
Anisakis simplex
ASIM_0001548701
I
ASU_00971
Ascaris suum
ASU_00971
I
ASU_03870
Ascaris suum
ASU_03870
I
BGLB013485
Biomphalaria glabrata
BGLB013485
I
Bm4980
Brugia malayi
Bm4980
I
Bm5457
Brugia malayi
Bm5457
I
Brh_R007127
Buceros rhinoceros
Brh_R007127
I
BTMF_0000217201
Brugia timori
BTMF_0000217201
I
BTMF_0001565301
Brugia timori
BTMF_0001565301
I
BXY_0053200
Bursaphelenchus xylophilus
BXY_0053200
I
BXY_0179600
Bursaphelenchus xylophilus
BXY_0179600
I
BXY_0861500
Bursaphelenchus xylophilus
BXY_0861500
I
BXY_1057600
Bursaphelenchus xylophilus
BXY_1057600
I
BXY_1082600
Bursaphelenchus xylophilus
BXY_1082600
I
BXY_1595900
Bursaphelenchus xylophilus
BXY_1595900
I
CapteG172322
Capitella teleta
CapteG172322
I
CBG03466
Caenorhabditis briggsae
CBG03466
I
CBG03844
Caenorhabditis briggsae
CBG03844
I
CBG03860
Caenorhabditis briggsae
CBG03860
I
CBG04240
Caenorhabditis briggsae
CBG04240
I
CBG13142
Caenorhabditis briggsae
CBG13142
I
CBG14485
Caenorhabditis briggsae
CBG14485
I
CBG14996
Caenorhabditis briggsae
CBG14996
I
CBG22587
Caenorhabditis briggsae
CBG22587
I
CBG22776
Caenorhabditis briggsae
CBG22776
I
CBN00088
Caenorhabditis brenneri
CBN00088
I
CBN04415
Caenorhabditis brenneri
CBN04415
I
CBN05776
Caenorhabditis brenneri
CBN05776
I
CBN08474
Caenorhabditis brenneri
CBN08474
I
CBN11572
Caenorhabditis brenneri
CBN11572
I
CBN18198
Caenorhabditis brenneri
CBN18198
I
CBN20749
Caenorhabditis brenneri
CBN20749
I
CBN21958
Caenorhabditis brenneri
CBN21958
I
CBN28641
Caenorhabditis brenneri
CBN28641
I
CBN32300
Caenorhabditis brenneri
CBN32300
I
CGOC_0000279901
Cylicostephanus goldi
CGOC_0000279901
I
CJA02727
Caenorhabditis japonica
CJA02727
I
CJA06107
Caenorhabditis japonica
CJA06107
I
CJA14035
Caenorhabditis japonica
CJA14035
I
CJA14248
Caenorhabditis japonica
CJA14248
I
CJA14611
Caenorhabditis japonica
CJA14611
I
CJA16040
Caenorhabditis japonica
CJA16040
I
CJA19445
Caenorhabditis japonica
CJA19445
I
Cmyd_10004185
Chelonia mydas
Cmyd_10004185
I
CRE00809
Caenorhabditis remanei
CRE00809
I
CRE07033
Caenorhabditis remanei
CRE07033
I
CRE08259
Caenorhabditis remanei
CRE08259
I
CRE08264
Caenorhabditis remanei
CRE08264
I
CRE09416
Caenorhabditis remanei
CRE09416
I
CRE10779
Caenorhabditis remanei
CRE10779
I
CRE21925
Caenorhabditis remanei
CRE21925
I
CRE22212
Caenorhabditis remanei
CRE22212
I
CRE24933
Caenorhabditis remanei
CRE24933
I
CRE26423
Caenorhabditis remanei
CRE26423
I
CRE29874
Caenorhabditis remanei
CRE29874
I
DICVIV_00957
Dictyocaulus viviparus
DICVIV_00957
I
DICVIV_01644
Dictyocaulus viviparus
DICVIV_01644
I
DICVIV_11073
Dictyocaulus viviparus
DICVIV_11073
I
DME_0000591901
Dracunculus medinensis
DME_0000591901
I
EEL_0000265301
Elaeophora elaphi
EEL_0000265301
I
HNF4A
Anolis carolinensis
ENSACAG00000016803
I
ENSAMEG00000003960
Ailuropoda melanoleuca
ENSAMEG00000003960
I
ENSAMXG00000017366
Astyanax mexicanus
ENSAMXG00000017366
I
ENSAPLG00000008950
Anas platyrhynchos
ENSAPLG00000008950
I
ENSAPLG00000011331
Anas platyrhynchos
ENSAPLG00000011331
I
HNF4A
Bos taurus
ENSBTAG00000012116
I
HNF4A
Canis familiaris
ENSCAFG00000009411
I
ENSCING00000009566
Ciona intestinalis
ENSCING00000009566
I
HNF4A
Cavia porcellus
ENSCPOG00000006812
I
ENSCSAG00000014124
Chlorocebus sabaeus
ENSCSAG00000014124
I
ENSCSAVG00000009430
Ciona savignyi
ENSCSAVG00000009430
I
hnf4a
Danio rerio
ENSDARG00000021494
I
CABZ01057488.2
Danio rerio
ENSDARG00000104742
I
HNF4A
Dasypus novemcinctus
ENSDNOG00000031801
I
Hnf4a
Dipodomys ordii
ENSDORG00000005971
I
HNF4A
Equus caballus
ENSECAG00000024450
I
ENSETEG00000011451
Echinops telfairi
ENSETEG00000011451
I
ENSFALG00000005250
Ficedula albicollis
ENSFALG00000005250
I
ENSFALG00000006678
Ficedula albicollis
ENSFALG00000006678
I
HNF4A
Felis catus
ENSFCAG00000008178
I
HNF4A
Homo sapiens
ENSG00000101076
D
hnf4a
Gasterosteus aculeatus
ENSGACG00000011485
I
HNF4A
Gallus gallus
ENSGALG00000004285
I
HNF4beta
Gallus gallus
ENSGALG00000005708
I
HNF4A
Gorilla gorilla
ENSGGOG00000006988
I
ENSGMOG00000001972
Gadus morhua
ENSGMOG00000001972
I
ENSGMOG00000011421
Gadus morhua
ENSGMOG00000011421
I
ENSLACG00000013810
Latimeria chalumnae
ENSLACG00000013810
I
HNF4A
Loxodonta africana
ENSLAFG00000022279
I
ENSLOCG00000004238
Lepisosteus oculatus
ENSLOCG00000004238
I
ENSMEUG00000001256
Macropus eugenii
ENSMEUG00000001256
I
ENSMEUG00000006900
Macropus eugenii
ENSMEUG00000006900
I
HNF4A
Meleagris gallopavo
ENSMGAG00000003970
I
ENSMGAG00000007214
Meleagris gallopavo
ENSMGAG00000007214
I
HNF4A
Myotis lucifugus
ENSMLUG00000000954
I
HNF4A
Macaca mulatta
ENSMMUG00000006464
I
HNF4A
Monodelphis domestica
ENSMODG00000016216
I
ENSMPUG00000017669
Mustela putorius furo
ENSMPUG00000017669
I
Hnf4a
Mus musculus
ENSMUSG00000017950
D
ENSNLEG00000006596
Nomascus leucogenys
ENSNLEG00000006596
I
ENSOANG00000006363
Ornithorhynchus anatinus
ENSOANG00000006363
I
HNF4G
Ornithorhynchus anatinus
ENSOANG00000011349
I
ENSOARG00000003928
Ovis aries
ENSOARG00000003928
I
HNF4A
Oryctolagus cuniculus
ENSOCUG00000006841
I
HNF4A
Otolemur garnettii
ENSOGAG00000029426
I
ENSONIG00000005911
Oreochromis niloticus
ENSONIG00000005911
I
ENSONIG00000016515
Oreochromis niloticus
ENSONIG00000016515
I
HNF4A
Ochotona princeps
ENSOPRG00000014280
I
ENSP00000343807
Macaca fascicularis
ENSP00000343807
I
ENSP00000343807-D1
Bos grunniens
ENSP00000343807-D1
I
ENSPANG00000026281
Papio anubis
ENSPANG00000026281
I
HNF4A
Procavia capensis
ENSPCAG00000010776
I
ENSPFOG00000000135
Poecilia formosa
ENSPFOG00000000135
I
ENSPFOG00000001827
Poecilia formosa
ENSPFOG00000001827
I
ENSPSIG00000012689
Pelodiscus sinensis
ENSPSIG00000012689
I
ENSPSIG00000017636
Pelodiscus sinensis
ENSPSIG00000017636
I
HNF4A
Pteropus vampyrus
ENSPVAG00000007420
I
Hnf4a
Rattus norvegicus
ENSRNOG00000008895
I
ENSSHAG00000007273
Sarcophilus harrisii
ENSSHAG00000007273
I
ENSSHAG00000009578
Sarcophilus harrisii
ENSSHAG00000009578
I
HNF4A
Sus scrofa
ENSSSCG00000007371
I
ENSSTOG00000020202
Ictidomys tridecemlineatus
ENSSTOG00000020202
I
ENSTGUG00000004174
Taeniopygia guttata
ENSTGUG00000004174
I
HNF4A
Taeniopygia guttata
ENSTGUG00000005271
I
ENSTGUG00000015669
Taeniopygia guttata
ENSTGUG00000015669
I
hnf4a
Tetraodon nigroviridis
ENSTNIG00000012436
I
hnf4a
Takifugu rubripes
ENSTRUG00000009982
I
ENSTSYG00000007661
Tarsius syrichta
ENSTSYG00000007661
I
HNF4A
Tursiops truncatus
ENSTTRG00000013004
I
ENSXMAG00000001220
Xiphophorus maculatus
ENSXMAG00000001220
I
ENSXMAG00000007901
Xiphophorus maculatus
ENSXMAG00000007901
I
EVEC_0000864401
Enterobius vermicularis
EVEC_0000864401
I
Hnf4
Drosophila melanogaster
FBgn0004914
D
GA21689
Drosophila pseudoobscura
FBgn0081674
I
GF14359
Drosophila ananassae
FBgn0091386
I
GG24056
Drosophila erecta
FBgn0116195
I
GH13232
Drosophila grimshawi
FBgn0120709
I
GI12430
Drosophila mojavensis
FBgn0135187
I
GL26219
Drosophila persimilis
FBgn0163801
I
GM12759
Drosophila sechellia
FBgn0167695
I
GD22387
Drosophila simulans
FBgn0193793
I
GJ17882
Drosophila virilis
FBgn0205050
I
GK18664
Drosophila willistoni
FBgn0220662
I
GE10817
Drosophila yakuba
FBgn0228657
I
GB45602
Apis mellifera
GB45602
I
genemark-nMf.1.1.scaf00584-processed-gene-0.4
Meloidogyne floridensis
genemark-nMf.1.1.scaf00584-processed-gene-0.4
I
genemark-nMf.1.1.scaf02603-processed-gene-0.3
Meloidogyne floridensis
genemark-nMf.1.1.scaf02603-processed-gene-0.3
I
Gfo_R000495
Geospiza fortis
Gfo_R000495
I
GPLIN_000327200
Globodera pallida
GPLIN_000327200
I
GPLIN_001175700
Globodera pallida
GPLIN_001175700
I
Hba_17038
Heterorhabditis bacteriophora
Hba_17038
I
HCOI00094500
Haemonchus contortus
HCOI00094500
I
HCOI00618700
Haemonchus contortus
HCOI00618700
I
HCOI01442000
Haemonchus contortus
HCOI01442000
I
HCOI01927800
Haemonchus contortus
HCOI01927800
I
HCOI01945300
Haemonchus contortus
HCOI01945300
I
HCOI02126500
Haemonchus contortus
HCOI02126500
I
HelroG67417
Helobdella robusta
HelroG67417
I
HPBE_0001033901
Heligmosomoides bakeri
HPBE_0001033901
I
HPBE_0001438801
Heligmosomoides bakeri
HPBE_0001438801
I
HPBE_0001524301
Heligmosomoides bakeri
HPBE_0001524301
I
HPLM_0000308401
Haemonchus placei
HPLM_0000308401
I
HPLM_0001358001
Haemonchus placei
HPLM_0001358001
I
Hsal_12926--NP_001011634.1_APIME
Harpegnathos saltator
Hsal_12926--NP_001011634.1_APIME
I
L596_g10816
Steinernema carpocapsae
L596_g10816
I
L596_g11035
Steinernema carpocapsae
L596_g11035
I
L596_g25910
Steinernema carpocapsae
L596_g25910
I
L596_g26401
Steinernema carpocapsae
L596_g26401
I
L596_g7829
Steinernema carpocapsae
L596_g7829
I
L596_g9904
Steinernema carpocapsae
L596_g9904
I
L889_g15424
Steinernema feltiae
L889_g15424
I
L889_g16305
Steinernema feltiae
L889_g16305
I
L889_g17247
Steinernema feltiae
L889_g17247
I
L889_g25097
Steinernema feltiae
L889_g25097
I
L889_g2977
Steinernema feltiae
L889_g2977
I
L889_g31970
Steinernema feltiae
L889_g31970
I
L889_g366
Steinernema feltiae
L889_g366
I
L892_g17146
Steinernema scapterisci
L892_g17146
I
L892_g17832
Steinernema scapterisci
L892_g17832
I
L892_g186
Steinernema scapterisci
L892_g186
I
L892_g23093
Steinernema scapterisci
L892_g23093
I
L892_g3438
Steinernema scapterisci
L892_g3438
I
L893_g13285
Steinernema glaseri
L893_g13285
I
L893_g263
Steinernema glaseri
L893_g263
I
L893_g33656
Steinernema glaseri
L893_g33656
I
L893_g5404
Steinernema glaseri
L893_g5404
I
L893_g6023
Steinernema glaseri
L893_g6023
I
L893_g6565
Steinernema glaseri
L893_g6565
I
L893_g6878
Steinernema glaseri
L893_g6878
I
L898_g11608
Steinernema monticolum
L898_g11608
I
L898_g18440
Steinernema monticolum
L898_g18440
I
L898_g26357
Steinernema monticolum
L898_g26357
I
L898_g32368
Steinernema monticolum
L898_g32368
I
L898_g5338
Steinernema monticolum
L898_g5338
I
L898_g9613
Steinernema monticolum
L898_g9613
I
LCUP010047
Lucilia cuprina
LCUP010047
I
LOAG_07549
Loa loa
LOAG_07549
I
LOAG_08615
Loa loa
LOAG_08615
I
MDOA009609
Musca domestica
MDOA009609
I
MhA1_Contig691.frz3.gene13
Meloidogyne hapla
MhA1_Contig691.frz3.gene13
I
Minc11307
Meloidogyne incognita
Minc11307
I
Myotis_brandtii_HNF4A_10025169
Myotis brandtii
Myotis_brandtii_HNF4A_10025169
I
nAv.1.0.1.g08447
Acanthocheilonema viteae
nAv.1.0.1.g08447
I
NBR_0000015501
Nippostrongylus brasiliensis
NBR_0000015501
I
nDi.2.2.2.g03974
Dirofilaria immitis
nDi.2.2.2.g03974
I
NECAME_02375
Necator americanus
NECAME_02375
I
nLs.2.1.2.g04526
Litomosoides sigmodontis
nLs.2.1.2.g04526
I
nOo.2.0.1.g02345
Onchocerca ochengi
nOo.2.0.1.g02345
I
nOo.2.0.1.g02628
Onchocerca ochengi
nOo.2.0.1.g02628
I
Ocbimv22001693m.g
Octopus bimaculoides
Ocbimv22001693m.g
I
OESDEN_00859
Oesophagostomum dentatum
OESDEN_00859
I
OFLC_0000076301
Onchocerca flexuosa
OFLC_0000076301
I
Ogr08849
Ophisaurus gracilis
Ogr08849
I
PEQ_0000391501
Parascaris equorum
PEQ_0000391501
I
PHUM477600
Pediculus humanus
PHUM477600
I
Ppa-nhr-14
Pristionchus pacificus
PPA06980
I
PPA22443
Pristionchus pacificus
PPA22443
I
Ppa-nhr-61
Pristionchus pacificus
PPA27722
I
PTRK_0000720500
Parastrongyloides trichosuri
PTRK_0000720500
I
PTRK_0000748600
Parastrongyloides trichosuri
PTRK_0000748600
I
PTRK_0001020800
Parastrongyloides trichosuri
PTRK_0001020800
I
PTRK_0001236400
Parastrongyloides trichosuri
PTRK_0001236400
I
PTRK_0001591500
Parastrongyloides trichosuri
PTRK_0001591500
I
Pvit_08765
Pogona vitticeps
Pvit_08765
I
Pvit_09735
Pogona vitticeps
Pvit_09735
I
RSKR_0000178700
Rhabditophanes kr3021
RSKR_0000178700
I
RSKR_0001175400
Rhabditophanes kr3021
RSKR_0001175400
I
scaffold107-EXSNAP2012.33
Pristionchus exspectatus
scaffold107-EXSNAP2012.33
I
scaffold1338-EXSNAP2012.3
Pristionchus exspectatus
scaffold1338-EXSNAP2012.3
I
scaffold277-EXSNAP2012.12
Pristionchus exspectatus
scaffold277-EXSNAP2012.12
I
scaffold488-EXSNAP2012.17
Pristionchus exspectatus
scaffold488-EXSNAP2012.17
I
scaffold52-EXSNAP2012.30
Pristionchus exspectatus
scaffold52-EXSNAP2012.30
I
scaffold605-EXSNAP2012.9
Pristionchus exspectatus
scaffold605-EXSNAP2012.9
I
SINV18643
Solenopsis invicta
SINV18643
I
SMAR014405
Strigamia maritima
SMAR014405
I
SMU15037562
Schmidtea mediterranea
SMU15037562
I
SMUV_0000230901
Syphacia muris
SMUV_0000230901
I
SMUV_0000835401
Syphacia muris
SMUV_0000835401
I
SPAL_0000533900
Strongyloides papillosus
SPAL_0000533900
I
SPAL_0000841700
Strongyloides papillosus
SPAL_0000841700
I
SPAL_0001056000
Strongyloides papillosus
SPAL_0001056000
I
SPAL_0001099500
Strongyloides papillosus
SPAL_0001099500
I
SPU_021192
Strongylocentrotus purpuratus
SPU_021192
I
SSTP_0000145700
Strongyloides stercoralis
SSTP_0000145700
I
SSTP_0000230100
Strongyloides stercoralis
SSTP_0000230100
I
SSTP_0000769100
Strongyloides stercoralis
SSTP_0000769100
I
SSTP_0000860300
Strongyloides stercoralis
SSTP_0000860300
I
SVE_0105800
Strongyloides venezuelensis
SVE_0105800
I
SVE_0858700
Strongyloides venezuelensis
SVE_0858700
I
SVE_1768400
Strongyloides venezuelensis
SVE_1768400
I
SVE_1799100
Strongyloides venezuelensis
SVE_1799100
I
SVUK_0000195901
Strongylus vulgaris
SVUK_0000195901
I
Tal_R003083
Tyto alba
Tal_R003083
I
TCLT_0000342401
Thelazia callipaeda
TCLT_0000342401
I
TCLT_0000461101
Thelazia callipaeda
TCLT_0000461101
I
TCNE_0000582701
Toxocara canis
TCNE_0000582701
I
TELCIR_07460
Teladorsagia circumcincta
TELCIR_07460
I
nhr-4
Caenorhabditis elegans
WBGene00003603
I
nhr-14
Caenorhabditis elegans
WBGene00003613
I
nhr-21
Caenorhabditis elegans
WBGene00003620
I
nhr-34
Caenorhabditis elegans
WBGene00003627
D
nhr-35
Caenorhabditis elegans
WBGene00003628
I
nhr-49
Caenorhabditis elegans
WBGene00003639
D
nhr-61
Caenorhabditis elegans
WBGene00003651
I
nhr-62
Caenorhabditis elegans
WBGene00003652
I
nhr-118
Caenorhabditis elegans
WBGene00003708
I
WBGene00236987
Onchocerca volvulus
WBGene00236987
I
WBGene00239376
Onchocerca volvulus
WBGene00239376
I
hnf4a.S
Xenopus laevis
XB-GENE-864872
I
XP_002159483.1
Hydra magnipapillata
XP_002159483.1
I