Bostr.9638s0030 (Boechera stricta)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Bostr.9638s0030 T022712_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARF8
M01697_2.00 		Arabidopsis thaliana
NHTGTCGGN
NCCGACADN		 PBM
Weirauch et al.(2014)
pTH8661 		0.990 0.990
ARF5
M06701_2.00 		Arabidopsis thaliana
WYTTGTCGGN
NCCGACAARW		 Dap-seq
OMalley et al.(2016)
MP_col 		0.735 0.735
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.9638s0030.1.p B3 126 228

Links

Other B3 family TFs
Other Boechera stricta TFs

563 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACAC_0000432501 Angiostrongylus cantonensis ACAC_0000432501 I
ALUE_0000438901 Ascaris lumbricoides ALUE_0000438901 I
ASU_10449 Ascaris suum ASU_10449 I
BGLB013372 Biomphalaria glabrata BGLB013372 I
Bm2330 Brugia malayi Bm2330 I
Brh_R012355 Buceros rhinoceros Brh_R012355 I
BXY_1656000 Bursaphelenchus xylophilus BXY_1656000 I
CapteG171657 Capitella teleta CapteG171657 I
CapteG222052 Capitella teleta CapteG222052 I
CapteG228847 Capitella teleta CapteG228847 I
CGI_10002009 Crassostrea gigas CGI_10002009 I
CGI_10015192 Crassostrea gigas CGI_10015192 I
csin104013 Clonorchis sinensis csin104013 I
D918_08596 Trichuris suis D918_08596 I
DME_0000850601 Dracunculus medinensis DME_0000850601 I
EEL_0000146201 Elaeophora elaphi EEL_0000146201 I
ENSAMXG00000002354 Astyanax mexicanus ENSAMXG00000002354 I
ENSCING00000003158 Ciona intestinalis ENSCING00000003158 I
ENSCING00000009952 Ciona intestinalis ENSCING00000009952 I
elf2a Danio rerio ENSDARG00000019459 I
ENSGACG00000003298 Gasterosteus aculeatus ENSGACG00000003298 I
SPDEF Loxodonta africana ENSLAFG00000002253 I
Spdef Mus musculus ENSMUSG00000024215 D
ENSPFOG00000015148 Poecilia formosa ENSPFOG00000015148 I
ENSPMAG00000009848 Petromyzon marinus ENSPMAG00000009848 I
Spdef Rattus norvegicus ENSRNOG00000000491 I
ENSVPAG00000011404 Vicugna pacos ENSVPAG00000011404 I
ENSXMAG00000013371 Xiphophorus maculatus ENSXMAG00000013371 I
EVEC_0000544201 Enterobius vermicularis EVEC_0000544201 I
e_gw.6.372.1 Branchiostoma floridae e_gw.6.372.1 I
fgenesh2_pg.scaffold_224000023 Branchiostoma floridae fgenesh2_pg.scaffold_224000023 I
HelroG70650 Helobdella robusta HelroG70650 I
L596_g13894 Steinernema carpocapsae L596_g13894 I
L889_g16275 Steinernema feltiae L889_g16275 I
L892_g9736 Steinernema scapterisci L892_g9736 I
L893_g30524 Steinernema glaseri L893_g30524 I
L898_g5545 Steinernema monticolum L898_g5545 I
LOAG_12382 Loa loa LOAG_12382 I
nAv.1.0.1.g02623 Acanthocheilonema viteae nAv.1.0.1.g02623 I
nDi.2.2.2.g08083 Dirofilaria immitis nDi.2.2.2.g08083 I
nLs.2.1.2.g01756 Litomosoides sigmodontis nLs.2.1.2.g01756 I
nOo.2.0.1.g09936 Onchocerca ochengi nOo.2.0.1.g09936 I
Ocbimv22000632m.g Octopus bimaculoides Ocbimv22000632m.g I
PTRK_0000680000 Parastrongyloides trichosuri PTRK_0000680000 I
RSKR_0000370800 Rhabditophanes kr3021 RSKR_0000370800 I
Sjc_0045590 Schistosoma japonicum Sjc_0045590 I
SMTD_0000204001 Schistosoma mattheei SMTD_0000204001 I
SMU15000306 Schmidtea mediterranea SMU15000306 N
SMU15009375 Schmidtea mediterranea SMU15009375 N
SPAL_0000294300 Strongyloides papillosus SPAL_0000294300 I
SSTP_0000826600 Strongyloides stercoralis SSTP_0000826600 I
SVE_1606500 Strongyloides venezuelensis SVE_1606500 I
T265_00304 Opisthorchis viverrini T265_00304 I
TCLT_0000555801 Thelazia callipaeda TCLT_0000555801 I
TCNE_0000859601 Toxocara canis TCNE_0000859601 I
TMUE_s0025002400 Trichuris muris TMUE_s0025002400 I
TriadG29770 Trichoplax adhaerens TriadG29770 I
TTRE_0000457801 Trichuris trichiura TTRE_0000457801 I
elf-1 Caenorhabditis elegans WBGene00016029 I
WBGene00244573 Onchocerca volvulus WBGene00244573 I