Pavir.Ib00539 (Panicum virgatum)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02362 (B3) IPR003340 Pavir.Ib00539 T023911_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.Ib00539.1.p B3 54 145

Links

Other B3 family TFs
Other Panicum virgatum TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA011321 Oryza indica BGIOSGA011321 N 0.783
BRADI1G72330 Brachypodium distachyon BRADI1G72330 N 0.804
F775_04216 Aegilops tauschii F775_04216 N 0.772
GRMZM2G028794 Zea mays GRMZM2G028794 N 0.924
GRMZM2G109480 Zea mays GRMZM2G109480 N 0.880
LPERR03G05580 Leersia perrieri LPERR03G05580 N 0.815
MLOC_71395 Hordeum vulgare MLOC_71395 N 0.772
OB03G16290 Oryza brachyantha OB03G16290 N 0.815
OBART03G06210 Oryza barthii OBART03G06210 N 0.783
OGLUM03G06210 Oryza glumaepatula OGLUM03G06210 N 0.783
OLONG_002463 Oryza longistaminata OLONG_002463 N 0.783
OMERI03G06040 Oryza meridionalis OMERI03G06040 N 0.750
ONIVA02G06710 Oryza nivara ONIVA02G06710 N 0.783
ORGLA03G0060000 Oryza glaberrima ORGLA03G0060000 N 0.783
ORUFI03G06050 Oryza rufipogon ORUFI03G06050 N 0.783
OS03G0184500 Oryza sativa OS03G0184500 N 0.783
Pavir.Ia04169 Panicum virgatum Pavir.Ia04169 N 0.957
Sb01g044910 Sorghum bicolor Sb01g044910 N 0.880
Si037266m.g Setaria italica Si037266m.g N 0.946
Traes_4AS_A7507A8AF Triticum aestivum Traes_4AS_A7507A8AF N 0.772
Traes_4BL_87A0339AD Triticum aestivum Traes_4BL_87A0339AD N 0.772
Traes_4DL_58F3F93CA Triticum aestivum Traes_4DL_58F3F93CA N 0.772
TRIUR3_04216 Triticum urartu TRIUR3_04216 N 0.772