cassava22532.valid.m1 (Manihot esculenta)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 cassava22532.valid.m1 T024794_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC6
M06719_2.00 		Arabidopsis thaliana
KAGAGAGAGAGAGAGAGAGAG
CTCTCTCTCTCTCTCTCTCTM		 Dap-seq
OMalley et al.(2016)
BPC6_col_a 		0.747 0.747
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava22532.valid.m1 BBR 1 345

Links

Other BBR family TFs
Other Manihot esculenta TFs

38 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_219293 Agaricus bisporus AGABI2DRAFT_219293 N
BOTBODRAFT_178587 Botryobasidium botryosum BOTBODRAFT_178587 N
CC1G_00087 Coprinopsis cinerea CC1G_00087 N
CERSUDRAFT_111616 Ceriporiopsis subvermispora CERSUDRAFT_111616 N
CY34DRAFT_20706 Suillus luteus CY34DRAFT_20706 N
DACRYDRAFT_119248 Dacryopinax sp DACRYDRAFT_119248 N
FIBRA_04937 Fibroporia radiculosa FIBRA_04937 N
FOMPIDRAFT_151160 Fomitopsis pinicola FOMPIDRAFT_151160 N
GALMADRAFT_205370 Galerina marginata GALMADRAFT_205370 N
GLOTRDRAFT_114211 Gloeophyllum trabeum GLOTRDRAFT_114211 N
HETIRDRAFT_311972 Heterobasidion irregulare HETIRDRAFT_311972 N
JAAARDRAFT_52756 Jaapia argillacea JAAARDRAFT_52756 N
K443DRAFT_672578 Laccaria amethystina K443DRAFT_672578 N
LACBIDRAFT_292149 Laccaria bicolor LACBIDRAFT_292149 N
M378DRAFT_72609 Amanita muscaria M378DRAFT_72609 N
M404DRAFT_13091 Pisolithus tinctorius M404DRAFT_13091 N
M413DRAFT_16666 Hebeloma cylindrosporum M413DRAFT_16666 N
Moror_17679 Moniliophthora roreri Moror_17679 N
PHACADRAFT_250391 Phanerochaete carnosa PHACADRAFT_250391 N
PHLGIDRAFT_97590 Phlebiopsis gigantea PHLGIDRAFT_97590 N
PILCRDRAFT_811575 Piloderma croceum PILCRDRAFT_811575 N
PISMIDRAFT_6124 Pisolithus microcarpus PISMIDRAFT_6124 N
PLEOSDRAFT_176003 Pleurotus ostreatus PLEOSDRAFT_176003 N
SCHCODRAFT_255185 Schizophyllum commune SCHCODRAFT_255185 N
SCLCIDRAFT_1210072 Scleroderma citrinum SCLCIDRAFT_1210072 N
SERLA73DRAFT_85551 Serpula lacrymans SERLA73DRAFT_85551 N
V565_194320 Rhizoctonia solani V565_194320 N