CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AMTR_s00024p00250640
(
Amborella trichopoda
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
AMTR_s00024p00250640
T025452_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ERN11335
BED ZF
43
85
SFYLKFFETAPDGKSRRCKFCKQNYSIATATGNLGRHLSHRHP
Links
Other
BED ZF
family TFs
Other
Amborella trichopoda
TFs
31 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CANTEDRAFT_126106
Candida tenuis
CANTEDRAFT_126106
N
CaO19.13396
Candida albicans
CaO19.13396
N
CaO19.5975
Candida albicans
CaO19.5975
N
CD36_85020
Candida dubliniensis
CD36_85020
N
CORT_0C04880
Candida orthopsilosis
CORT_0C04880
N
CPAG_05121
Candida parapsilosis
CPAG_05121
N
CTRG_02529
Candida tropicalis
CTRG_02529
N
DEHA2B13904g
Debaryomyces hansenii
DEHA2B13904g
N
e_gwh1.8.1.646.1
Pichia stipitis
e_gwh1.8.1.646.1
N
G210_0176
Candida maltosa
G210_0176
N
GNLVRS01_PISO0C01916g
Millerozyma farinosa
GNLVRS01_PISO0C01916g
N
GNLVRS01_PISO0D02005g
Millerozyma farinosa
GNLVRS01_PISO0D02005g
N
PGUG_01822
Candida guilliermondii
PGUG_01822
N
PGUG_01822
Meyerozyma guilliermondii
PGUG_01822
N
SPAPADRAFT_61969
Spathaspora passalidarum
SPAPADRAFT_61969
N