CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BRADI2G07297
(
Brachypodium distachyon
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
BRADI2G07297
T025681_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BRADI2G07297.1
BED ZF
25
70
DACWEYGDKLDGNRVRCKFCLKIINGGISRFKFHLSQIPSKGVNPC
BRADI2G07297.2
BED ZF
5
50
DACWEYGDKLDGNRVRCKFCLKIINGGISRFKFHLSQIPSKGVNPC
Links
Other
BED ZF
family TFs
Other
Brachypodium distachyon
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30169.m006547
Ricinus communis
30169.m006547
N
AT1G79740
Arabidopsis thaliana
AT1G79740
N
Carubv10019846m.g
Capsella rubella
Carubv10019846m.g
N
Cla004997
Citrullus lanatus
Cla004997
N
Cucsa.201910
Cucumis sativus
Cucsa.201910
N
evm.TU.supercontig_3.39
Carica papaya
evm.TU.supercontig_3.39
N
0.769
gene13122-v1.0-hybrid
Fragaria vesca
gene13122-v1.0-hybrid
N
GLYMA06G12991
Glycine max
GLYMA06G12991
N
GSMUA_Achr8G19830_001
Musa acuminata
GSMUA_Achr8G19830_001
N
0.718
MDP0000411586
Malus domestica
MDP0000411586
N
MDP0000520527
Malus domestica
MDP0000520527
N
Pavir.Ea00125
Panicum virgatum
Pavir.Ea00125
N
0.821
Pavir.Eb00173
Panicum virgatum
Pavir.Eb00173
N
0.800
PGSC0003DMG400009096
Solanum tuberosum
PGSC0003DMG400009096
N
0.795
PK04121.1
Cannabis sativa
PK04121.1
N
PRUPE_ppa002763mg
Prunus persica
PRUPE_ppa002763mg
N
Sb03g001335
Sorghum bicolor
Sb03g001335
N
0.800
Solyc03g007510.2
Solanum lycopersicum
Solyc03g007510.2
N
0.769
TCM_015328
Theobroma cacao
TCM_015328
N