CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
GLYMA17G13141
(
Glycine max
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
GLYMA17G13141
T026672_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA17G13141.1
BED ZF
79
121
SVYLKFFETAADGKTRRCKFCGQSYSIATATGNLGRHLANRHP
GLYMA17G13141.2
BED ZF
62
104
SVYLKFFETAADGKTRRCKFCGQSYSIATATGNLGRHLANRHP
Links
Other
BED ZF
family TFs
Other
Glycine max
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_045_00093
Aquilegia coerulea
Aquca_045_00093
N
NFXL2
Arabidopsis thaliana
AT5G05660
N
Bo9g177030
Brassica oleracea
Bo9g177030
N
Bostr.13129s0405
Boechera stricta
Bostr.13129s0405
N
Bra009123
Brassica rapa
Bra009123
N
Cagra.1504s0067
Capsella grandiflora
Cagra.1504s0067
N
cassava20878.m1
Manihot esculenta
cassava20878.m1
N
Ca_13412
Cicer arietinum
Ca_13412
N
Cucsa.136670
Cucumis sativus
Cucsa.136670
N
Eucgr.J00206
Eucalyptus grandis
Eucgr.J00206
N
evm.TU.supercontig_19.173
Carica papaya
evm.TU.supercontig_19.173
N
ATNFXL2
Arabidopsis lyrata
fgenesh2_kg.6__500__AT5G05660.1
N
Gorai.010G197800
Gossypium raimondii
Gorai.010G197800
N
mgf001689m
Mimulus guttatus
mgf001689m
N
MLOC_4879
Hordeum vulgare
MLOC_4879
N
Pm018929
Prunus mume
Pm018929
N
POPTR_0010s19600
Populus trichocarpa
POPTR_0010s19600
N
PRUPE_ppa001277mg
Prunus persica
PRUPE_ppa001277mg
N
SELMODRAFT_510
Selaginella moellendorffii
SELMODRAFT_510
N
Solyc06g051570.2
Solanum lycopersicum
Solyc06g051570.2
N
TCM_042496
Theobroma cacao
TCM_042496
N
Thhalv10012642m.g
Eutrema salsugineum
Thhalv10012642m.g
N
Traes_3AS_496047B73
Triticum aestivum
Traes_3AS_496047B73
N
ATNFXL2
Vitis vinifera
VIT_13s0067g00920
N