OB08G27850 (Oryza brachyantha)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 OB08G27850 T027057_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OB08G27850.1 BED ZF 121 174

Links

Other BED ZF family TFs
Other Oryza brachyantha TFs

97 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30076.m004659 Ricinus communis 30076.m004659 I
30131.m007078 Ricinus communis 30131.m007078 I
Aquca_003_00556 Aquilegia coerulea Aquca_003_00556 I
Aquca_006_00040 Aquilegia coerulea Aquca_006_00040 I
Aquca_006_00360 Aquilegia coerulea Aquca_006_00360 I
Aquca_022_00003 Aquilegia coerulea Aquca_022_00003 I
Aquca_024_00067 Aquilegia coerulea Aquca_024_00067 N
ATBZIP42 Arabidopsis thaliana AT3G30530 D
Bo2g012800 Brassica oleracea Bo2g012800 I
Bo3g010620 Brassica oleracea Bo3g010620 I
Bo9g163740 Brassica oleracea Bo9g163740 I
Bostr.2902s0318 Boechera stricta Bostr.2902s0318 I
Bra008670 Brassica rapa Bra008670 I
Bra023540 Brassica rapa Bra023540 I
Cagra.6845s0027 Capsella grandiflora Cagra.6845s0027 I
Carubv10002068m.g Capsella rubella Carubv10002068m.g I
cassava1498.valid.m1 Manihot esculenta cassava1498.valid.m1 N
cassava24775.valid.m1 Manihot esculenta cassava24775.valid.m1 I
cassava35454.valid.m1 Manihot esculenta cassava35454.valid.m1 I
cassava40461.m1 Manihot esculenta cassava40461.m1 I
cassava41140.m1 Manihot esculenta cassava41140.m1 I
cassava9577.m1 Manihot esculenta cassava9577.m1 I
Ca_09362 Cicer arietinum Ca_09362 I
chr2.CM0021.50.nd Lotus japonicus chr2.CM0021.50.nd I
Ciclev10002731m.g Citrus clementina Ciclev10002731m.g N
Ciclev10027584m.g Citrus clementina Ciclev10027584m.g I
Ciclev10029834m.g Citrus clementina Ciclev10029834m.g I
Cla016748 Citrullus lanatus Cla016748 I
Cla016841 Citrullus lanatus Cla016841 I
Cla022814 Citrullus lanatus Cla022814 N
Cucsa.109420 Cucumis sativus Cucsa.109420 I
Cucsa.174700 Cucumis sativus Cucsa.174700 I
Cucsa.238410 Cucumis sativus Cucsa.238410 I
Cucsa.248080 Cucumis sativus Cucsa.248080 N
Eucgr.H02330 Eucalyptus grandis Eucgr.H02330 I
Eucgr.I02090 Eucalyptus grandis Eucgr.I02090 I
evm.TU.supercontig_538.1 Carica papaya evm.TU.supercontig_538.1 I
AtbZIP3 Arabidopsis lyrata fgenesh2_kg.6__1562__AT5G15830.1 I
gene08757-v1.0-hybrid Fragaria vesca gene08757-v1.0-hybrid I
gene21832-v1.0-hybrid Fragaria vesca gene21832-v1.0-hybrid I
GLYMA01G40370 Glycine max GLYMA01G40370 I
GLYMA11G04920 Glycine max GLYMA11G04920 I
GLYMA11G12240 Glycine max GLYMA11G12240 I
GLYMA12G04440 Glycine max GLYMA12G04440 I
GLYMA17G17100 Glycine max GLYMA17G17100 I
GLYMA19G05050 Glycine max GLYMA19G05050 I
Gorai.001G000600 Gossypium raimondii Gorai.001G000600 I
Gorai.003G032100 Gossypium raimondii Gorai.003G032100 I
Gorai.008G065300 Gossypium raimondii Gorai.008G065300 I
GSMUA_Achr10G12910_001 Musa acuminata GSMUA_Achr10G12910_001 I
GSMUA_Achr11G05140_001 Musa acuminata GSMUA_Achr11G05140_001 I
GSMUA_Achr11G20700_001 Musa acuminata GSMUA_Achr11G20700_001 I
GSMUA_Achr1G12710_001 Musa acuminata GSMUA_Achr1G12710_001 I
GSMUA_Achr2G06540_001 Musa acuminata GSMUA_Achr2G06540_001 I
GSMUA_Achr4G03790_001 Musa acuminata GSMUA_Achr4G03790_001 I
GSMUA_Achr8G29960_001 Musa acuminata GSMUA_Achr8G29960_001 I
gw1.83.117.1 Physcomitrella patens gw1.83.117.1 I
Lus10010005.g Linum usitatissimum Lus10010005.g I
Lus10011722.g Linum usitatissimum Lus10011722.g I
Lus10013059.g Linum usitatissimum Lus10013059.g I
Lus10025024.g Linum usitatissimum Lus10025024.g I
Lus10029101.g Linum usitatissimum Lus10029101.g I
MDP0000183562 Malus domestica MDP0000183562 I
MDP0000205823 Malus domestica MDP0000205823 I
MDP0000239026 Malus domestica MDP0000239026 I
MDP0000863909 Malus domestica MDP0000863909 I
MDP0000891108 Malus domestica MDP0000891108 I
mgf003466m Mimulus guttatus mgf003466m I
mgf017392m Mimulus guttatus mgf017392m I
mgf018581m Mimulus guttatus mgf018581m I
MTR_1g087040 Medicago truncatula MTR_1g087040 I
MTR_4g097440 Medicago truncatula MTR_4g097440 I
MTR_5g015090 Medicago truncatula MTR_5g015090 I
MTR_7g029400 Medicago truncatula MTR_7g029400 I
orange1.1g029952m.g Citrus sinensis orange1.1g029952m.g I
orange1.1g041765m.g Citrus sinensis orange1.1g041765m.g N
orange1.1g044691m.g Citrus sinensis orange1.1g044691m.g I
Pavir.Fb01406 Panicum virgatum Pavir.Fb01406 N
PGSC0003DMG400001916 Solanum tuberosum PGSC0003DMG400001916 I
PGSC0003DMG400003529 Solanum tuberosum PGSC0003DMG400003529 I
PGSC0003DMG400030946 Solanum tuberosum PGSC0003DMG400030946 I
PK07533.1 Cannabis sativa PK07533.1 I
Pm002353 Prunus mume Pm002353 I
Pm015434 Prunus mume Pm015434 I
POPTR_0002s19720 Populus trichocarpa POPTR_0002s19720 I
POPTR_0004s16560 Populus trichocarpa POPTR_0004s16560 I
POPTR_0007s14740 Populus trichocarpa POPTR_0007s14740 I
POPTR_0009s12250 Populus trichocarpa POPTR_0009s12250 I
PRUPE_ppa011366mg Prunus persica PRUPE_ppa011366mg I
PRUPE_ppa011589mg Prunus persica PRUPE_ppa011589mg I
PRUPE_ppa011644mg Prunus persica PRUPE_ppa011644mg I
SapurV1A.0158s0220 Salix purpurea SapurV1A.0158s0220 I
SapurV1A.0396s0080 Salix purpurea SapurV1A.0396s0080 I
SapurV1A.3521s0020 Salix purpurea SapurV1A.3521s0020 I
Sb07g015450 Sorghum bicolor Sb07g015450 N
SELMODRAFT_17884 Selaginella moellendorffii SELMODRAFT_17884 I
SELMODRAFT_17886 Selaginella moellendorffii SELMODRAFT_17886 I
Si014523m.g Setaria italica Si014523m.g N
Solyc02g084860.1 Solanum lycopersicum Solyc02g084860.1 I
Solyc03g033730.1 Solanum lycopersicum Solyc03g033730.1 I
Solyc04g005170.1 Solanum lycopersicum Solyc04g005170.1 I
TCM_000835 Theobroma cacao TCM_000835 I
Thhalv10015835m.g Eutrema salsugineum Thhalv10015835m.g I
VIT_03s0038g04450 Vitis vinifera VIT_03s0038g04450 I
VIT_05s0077g01140 Vitis vinifera VIT_05s0077g01140 I