MDP0000155004 (Malus domestica)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 MDP0000155004 T028379_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000155004 BED ZF 35 77

Links

Other BED ZF family TFs
Other Malus domestica TFs

33 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00024p00250640 Amborella trichopoda AMTR_s00024p00250640 N 0.860
Aquca_002_01079 Aquilegia coerulea Aquca_002_01079 N 0.791
AT1G18560 Arabidopsis thaliana AT1G18560 N 0.860
Bo5g083750 Brassica oleracea Bo5g083750 N 0.767
Bo8g104310 Brassica oleracea Bo8g104310 N 0.767
Bostr.7128s0463 Boechera stricta Bostr.7128s0463 N 0.860
Cagra.0909s0036 Capsella grandiflora Cagra.0909s0036 N 0.860
Carubv10008481m.g Capsella rubella Carubv10008481m.g N 0.860
cassava37498.valid.m1 Manihot esculenta cassava37498.valid.m1 N 0.930
cassava37499.valid.m1 Manihot esculenta cassava37499.valid.m1 N 0.930
cassava37500.valid.m1 Manihot esculenta cassava37500.valid.m1 N 0.930
Ciclev10019100m.g Citrus clementina Ciclev10019100m.g N 0.930
Cucsa.090680 Cucumis sativus Cucsa.090680 N 0.953
Eucgr.B00689 Eucalyptus grandis Eucgr.B00689 N 0.884
gene26197-v1.0-hybrid Fragaria vesca gene26197-v1.0-hybrid N 0.930
GLYMA05G07875 Glycine max GLYMA05G07875 N 0.907
GLYMA17G13141 Glycine max GLYMA17G13141 N 0.907
Gorai.007G008000 Gossypium raimondii Gorai.007G008000 N 0.907
LjSGA_062426.1 Lotus japonicus LjSGA_062426.1 N 0.907
MDP0000637083 Malus domestica MDP0000637083 N 0.977
orange1.1g008805m.g Citrus sinensis orange1.1g008805m.g N 0.930
PDK_20s1489551g002 Phoenix dactylifera PDK_20s1489551g002 N 0.884
PGSC0003DMG400005619 Solanum tuberosum PGSC0003DMG400005619 N 0.860
PK14806.1 Cannabis sativa PK14806.1 N 0.953
Pm030213 Prunus mume Pm030213 N 0.953
POPTR_0012s05580 Populus trichocarpa POPTR_0012s05580 N 0.953
PRUPE_ppa002398mg Prunus persica PRUPE_ppa002398mg N 0.953
SapurV1A.0851s0040 Salix purpurea SapurV1A.0851s0040 N 0.953
SapurV1A.3382s0020 Salix purpurea SapurV1A.3382s0020 N 0.953
Solyc03g119830.2 Solanum lycopersicum Solyc03g119830.2 N 0.860
TCM_012243 Theobroma cacao TCM_012243 N 0.907
Thhalv10006990m.g Eutrema salsugineum Thhalv10006990m.g N 0.860
VIT_17s0000g04250 Vitis vinifera VIT_17s0000g04250 N 0.953