Pavir.J16563 (Panicum virgatum)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Pavir.J16563 T028584_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J16563.1.p BED ZF 30 80
Pavir.J16563.1.p BED ZF 130 174

Links

Other BED ZF family TFs
Other Panicum virgatum TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA028099 Oryza indica BGIOSGA028099 N 0.814
BRADI5G22670 Brachypodium distachyon BRADI5G22670 N 0.709
OB08G14980 Oryza brachyantha OB08G14980 N 0.791
ONIVA08G04740 Oryza nivara ONIVA08G04740 N 0.814
OPUNC08G04700 Oryza punctata OPUNC08G04700 N 0.814
ORUFI08G05400 Oryza rufipogon ORUFI08G05400 N 0.814
OS08G0180500 Oryza sativa OS08G0180500 N 0.814
Pavir.Fb00509 Panicum virgatum Pavir.Fb00509 N 0.977
Pavir.Gb00429 Panicum virgatum Pavir.Gb00429 N 0.709
Sb07g005045 Sorghum bicolor Sb07g005045 N 0.930
Si013272m.g Setaria italica Si013272m.g N 0.953