CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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scaffold547-EXSNAP2012.7
(
Pristionchus exspectatus
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF02892 (zf-BED)
IPR003656
scaffold547-EXSNAP2012.7
T029674_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold547-EXSNAP2012.7
BED ZF
114
158
HPVWEFFRDLKLENGSSSVLCLHCGWTGEDRSPNNLRTHLKKSHS
Links
Other
BED ZF
family TFs
Other
Pristionchus exspectatus
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Aquca_014_00370
Aquilegia coerulea
Aquca_014_00370
N
cassava26784.m1
Manihot esculenta
cassava26784.m1
N
Ca_13101
Cicer arietinum
Ca_13101
N
chr1.CM0982.460.nd
Lotus japonicus
chr1.CM0982.460.nd
N
Ciclev10000671m.g
Citrus clementina
Ciclev10000671m.g
N
GLYMA04G42090
Glycine max
GLYMA04G42090
N
Gorai.005G083700
Gossypium raimondii
Gorai.005G083700
N
GSMUA_Achr10G17290_001
Musa acuminata
GSMUA_Achr10G17290_001
N
GSMUA_Achr3G02410_001
Musa acuminata
GSMUA_Achr3G02410_001
N
MDP0000859087
Malus domestica
MDP0000859087
N
OLONG_003002
Oryza longistaminata
OLONG_003002
N
orange1.1g007853m.g
Citrus sinensis
orange1.1g007853m.g
N
PDK_20s1392371g003
Phoenix dactylifera
PDK_20s1392371g003
N
TCM_035362
Theobroma cacao
TCM_035362
N